RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 ARID3BQ8IVW6 561 aaPredicted RBP8.09□□□□□ -1.11
VAT1-209ENST00000592388 ELMOD1Q8N336 334 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 TMEM130Q8N3G9 435 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 MINDY1Q8N5J2 469 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 C4orf32Q8N8J7 132 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 TSTD1Q8NFU3 115 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 ERMNQ8TAM6 284 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 SNX29Q8TEQ0 813 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 PRIMPOLQ96LW4 560 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 ZNF512Q96ME7 567 aaPredicted RBP8.09□□□□□ -1.11
VAT1-209ENST00000592388 NACC1Q96RE7 527 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 RUSC1Q9BVN2 902 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 BHMT2Q9H2M3 363 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 FOXP1Q9H334 677 aaPredicted RBP8.09□□□□□ -1.11
VAT1-209ENST00000592388 FBRSL1Q9HCM7 1045 aaKnown RBP8.09□□□□□ -1.11
VAT1-209ENST00000592388 ASAH2Q9NR71 780 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 DDX19AQ9NUU7 478 aaKnown RBP8.09□□□□□ -1.11
VAT1-209ENST00000592388 KIAA1024Q9UPX6 916 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 APOBEC2Q9Y235 224 aaKnown RBP8.09□□□□□ -1.11
VAT1-209ENST00000592388 PCDHB6Q9Y5E3 794 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 SPTAN1Q13813 2472 aaKnown RBP8.09□□□□□ -1.11
VAT1-209ENST00000592388 ADAMTS9Q9P2N4 1935 aa8.09□□□□□ -1.11
VAT1-209ENST00000592388 COL12A1Q99715 3063 aa8.09□□□□□ -1.12
VAT1-209ENST00000592388 DOPEY2Q9Y3R5 2298 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 A0A1W2PRU2 124 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 E9PMD0 336 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 I3L4J1 428 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 ACKR2O00590 384 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 TNFRSF10BO14763 440 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 KRT38O76015 456 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 CD2BP2O95400 341 aaKnown RBP8.08□□□□□ -1.12
VAT1-209ENST00000592388 SEC24AO95486 1093 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 U2AF2P26368 475 aaKnown RBP eCLIP8.08□□□□□ -1.12
VAT1-209ENST00000592388 FXR2P51116 673 aaKnown RBP eCLIP8.08□□□□□ -1.12
VAT1-209ENST00000592388 HMGN5P82970 282 aaKnown RBP8.08□□□□□ -1.12
VAT1-209ENST00000592388 CACNB1Q02641 598 aaPredicted RBP8.08□□□□□ -1.12
VAT1-209ENST00000592388 GFPT1Q06210 699 aaPredicted RBP8.08□□□□□ -1.12
VAT1-209ENST00000592388 SOX4Q06945 474 aaPredicted RBP8.08□□□□□ -1.12
VAT1-209ENST00000592388 PSMD2Q13200 908 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 ITPRIPL2Q3MIP1 535 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 COLEC12Q5KU26 742 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 STXBP5Q5T5C0 1151 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 ATF7IP2Q5U623 682 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 HAUS3Q68CZ6 603 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 ANO7Q6IWH7 933 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 TAS1R3Q7RTX0 852 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 TMPRSS7Q7RTY8 843 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 KCNK18Q7Z418 384 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 TTC30AQ86WT1 665 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 DAW1Q8N136 415 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 FAM184AQ8NB25 1140 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 SPRYD3Q8NCJ5 442 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 C3orf58Q8NDZ4 430 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 ZNF461Q8TAF7 563 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 SHKBP1Q8TBC3 707 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 SPATA18Q8TC71 538 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 RLN3Q8WXF3 142 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 LLPHQ9BRT6 129 aaKnown RBP8.08□□□□□ -1.12
VAT1-209ENST00000592388 GPR88Q9GZN0 384 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 C2orf40Q9H1Z8 148 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 CEP72Q9P209 647 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 DNMT3LQ9UJW3 386 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 SLC6A14Q9UN76 642 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 INSL5Q9Y5Q6 135 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 MYO9AB2RTY4 2548 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 PTPRBP23467 1997 aa8.08□□□□□ -1.12
VAT1-209ENST00000592388 PHLPP2Q6ZVD8 1323 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 FAM149AA5PLN7 773 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 CCDC169A6NNP5 214 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 B8ZZF3 427 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 TRDMT1O14717 391 aaKnown RBP8.07□□□□□ -1.12
VAT1-209ENST00000592388 SLC28A2O43868 658 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 HIP1RO75146 1068 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 ABLIM3O94929 683 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 THP07101 528 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 HARSP12081 509 aaKnown RBP8.07□□□□□ -1.12
VAT1-209ENST00000592388 FGFR3P22607 806 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 ITPKAP23677 461 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 TKTP29401 623 aaKnown RBP8.07□□□□□ -1.12
VAT1-209ENST00000592388 EIF2S3P41091 472 aaKnown RBP8.07□□□□□ -1.12
VAT1-209ENST00000592388 BRCC3P46736 316 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 CLCNKBP51801 687 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 PEX3P56589 373 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 OSTNP61366 133 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 RAD51AP2Q09MP3 1159 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 TWF1Q12792 350 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 MAPK7Q13164 816 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 ORC2Q13416 577 aaPredicted RBP8.07□□□□□ -1.12
VAT1-209ENST00000592388 ZRSR1Q15695 479 aaKnown RBP8.07□□□□□ -1.12
VAT1-209ENST00000592388 ZNF568Q3ZCX4 644 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 NAIF1Q69YI7 327 aaPredicted RBP8.07□□□□□ -1.12
VAT1-209ENST00000592388 CD300LGQ6UXG3 332 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 LRRC69Q6ZNQ3 347 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 LPCAT2Q7L5N7 544 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 GPR155Q7Z3F1 870 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 TCEAL8Q8IYN2 117 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 FRMD1Q8N878 549 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 IGSF22Q8N9C0 903 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 CHFRQ96EP1 664 aa8.07□□□□□ -1.12
VAT1-209ENST00000592388 DDX27Q96GQ7 796 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms