RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TSPY8P0CW00 308 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 UQCRBP14927 111 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 MUTP22033 750 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 TM4SF1P30408 202 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 HALP42357 657 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 CHN2P52757 468 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 TBL3Q12788 808 aaKnown RBP15.97■□□□□ 0.15
CIRBP-228ENST00000590347 ALCAMQ13740 583 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 TLR1Q15399 786 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 ARSHQ5FYA8 562 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 C6orf163Q5TEZ5 329 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 TMEM214Q6NUQ4 689 aaKnown RBP15.97■□□□□ 0.15
CIRBP-228ENST00000590347 SMYD1Q8NB12 490 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.97■□□□□ 0.153e-8■■□□□ 11.7
CIRBP-228ENST00000590347 MORC4Q8TE76 937 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 FAM81BQ96LP2 452 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 FAM111AQ96PZ2 611 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 SPZ1Q9BXG8 430 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 OSBPL8Q9BZF1 889 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 NYXQ9GZU5 481 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 UNC45AQ9H3U1 944 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 MANSC1Q9H8J5 431 aa15.97■□□□□ 0.15
CIRBP-228ENST00000590347 MAGEB2O15479 319 aa15.96■□□□□ 0.15
CIRBP-228ENST00000590347 SERPINB8P50452 374 aa15.96■□□□□ 0.15
CIRBP-228ENST00000590347 TMEM259Q4ZIN3 620 aa15.96■□□□□ 0.15
CIRBP-228ENST00000590347 AMIGO2Q86SJ2 522 aa15.96■□□□□ 0.15
CIRBP-228ENST00000590347 PRPF39Q86UA1 669 aaKnown RBP15.96■□□□□ 0.15
CIRBP-228ENST00000590347 DZIP1Q86YF9 867 aaKnown RBP15.96■□□□□ 0.15
CIRBP-228ENST00000590347 OXNAD1Q96HP4 312 aaPredicted RBP15.96■□□□□ 0.15
CIRBP-228ENST00000590347 PRICKLE1Q96MT3 831 aaPredicted RBP15.96■□□□□ 0.15
CIRBP-228ENST00000590347 PCDHB18PQ96TA0 734 aa15.96■□□□□ 0.15
CIRBP-228ENST00000590347 LGALS13Q9UHV8 139 aa15.96■□□□□ 0.15
CIRBP-228ENST00000590347 GSTT2P0CG29 244 aa15.96■□□□□ 0.14
CIRBP-228ENST00000590347 GSTT2BP0CG30 244 aa15.96■□□□□ 0.14
CIRBP-228ENST00000590347 ITIH2P19823 946 aa15.96■□□□□ 0.14
CIRBP-228ENST00000590347 SSTR1P30872 391 aa15.96■□□□□ 0.14
CIRBP-228ENST00000590347 CDK16Q00536 496 aa15.96■□□□□ 0.14
CIRBP-228ENST00000590347 UTS2BQ765I0 119 aa15.96■□□□□ 0.14
CIRBP-228ENST00000590347 TRMT1LQ7Z2T5 733 aaKnown RBP15.96■□□□□ 0.14
CIRBP-228ENST00000590347 NSUN4Q96CB9 384 aaKnown RBP15.96■□□□□ 0.14
CIRBP-228ENST00000590347 TMEM47Q9BQJ4 181 aa15.96■□□□□ 0.14
CIRBP-228ENST00000590347 FHDC1Q9C0D6 1143 aaPredicted RBP15.96■□□□□ 0.14
CIRBP-228ENST00000590347 UBE2TQ9NPD8 197 aaPredicted RBP15.96■□□□□ 0.14
CIRBP-228ENST00000590347 ANLNQ9NQW6 1124 aa15.96■□□□□ 0.14
CIRBP-228ENST00000590347 WHRNQ9P202 907 aa15.96■□□□□ 0.14
CIRBP-228ENST00000590347 TSC22D4Q9Y3Q8 395 aa15.96■□□□□ 0.14
CIRBP-228ENST00000590347 IRX4P78413 519 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 CC2D2BQ6DHV5 1058 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 NRAPQ86VF7 1730 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 GALNT4Q8N4A0 578 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 GSDMBQ8TAX9 411 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 FAM84AQ96KN4 292 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 RILPQ96NA2 401 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 GPR88Q9GZN0 384 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 PCDHA12Q9UN75 941 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 PRR5-ARHGAP8B1AHC4 643 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 LDHAP00338 332 aaKnown RBP15.95■□□□□ 0.14
CIRBP-228ENST00000590347 IFNB1P01574 187 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 GPSM2P81274 684 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 ARHGAP8P85298 464 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 STAT4Q14765 748 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 DHDDSQ86SQ9 333 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 RAB3IL1Q8TBN0 382 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 ZNF564Q8TBZ8 553 aaPredicted RBP15.95■□□□□ 0.14
CIRBP-228ENST00000590347 GRIN3AQ8TCU5 1115 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 AGPAT1Q99943 283 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 TBC1D30Q9Y2I9 924 aa15.95■□□□□ 0.14
CIRBP-228ENST00000590347 DIS3Q9Y2L1 958 aaKnown RBP15.95■□□□□ 0.14
CIRBP-228ENST00000590347 TMA7Q9Y2S6 64 aaKnown RBP15.95■□□□□ 0.14
CIRBP-228ENST00000590347 PI4K2BG5E9Z4 385 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 SGPL1O95470 568 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 BCRP11274 1271 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 NMT1P30419 496 aaKnown RBP15.94■□□□□ 0.14
CIRBP-228ENST00000590347 KNOP1Q1ED39 458 aaKnown RBP15.94■□□□□ 0.14
CIRBP-228ENST00000590347 USP17L6PQ6QN14 398 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 SH3GLB2Q9NR46 395 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 HTR3EA5X5Y0 456 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 RIMBP2O15034 1052 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 MED24O75448 989 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 ACTR3P61158 418 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 LPIN1Q14693 890 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 ITPRIPL1Q6GPH6 555 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 ARHGAP27Q6ZUM4 889 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 ZNF804AQ7Z570 1209 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 ARID3BQ8IVW6 561 aaPredicted RBP15.94■□□□□ 0.14
CIRBP-228ENST00000590347 HAS1Q92839 578 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 SKA1Q96BD8 255 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 REEP2Q9BRK0 252 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 TRAIPQ9BWF2 469 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 ZNF219Q9P2Y4 722 aaPredicted RBP15.94■□□□□ 0.14
CIRBP-228ENST00000590347 USTQ9Y2C2 406 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 WDR37Q9Y2I8 494 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 ANKRD36CQ5JPF3 1778 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 C6orf222P0C671 652 aaPredicted RBP15.94■□□□□ 0.14
CIRBP-228ENST00000590347 RAG1P15918 1043 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 RPL10P27635 214 aaKnown RBP15.94■□□□□ 0.14
CIRBP-228ENST00000590347 CIITAP33076 1130 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 CD97P48960 835 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 CLCN2P51788 898 aa15.94■□□□□ 0.14
CIRBP-228ENST00000590347 ATP1A4Q13733 1029 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms