RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	C1QTNF1	Q9BXJ1	281 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	VRTN	Q9H8Y1	702 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	KCNK12	Q9HB15	430 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	DDX43	Q9NXZ2	648 aa	Known RBP	18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	PTPRD	P23468	1912 aa		18.58	■□□□□ 0.56
MBD1-221	ENST00000589867	TRIM49B	A6NDI0	452 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	PPP1R3G	B7ZBB8	358 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	ANHX	E9PGG2	379 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	ATP2C2	O75185	946 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	TRIM49	P0CI25	452 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	TRIM49C	P0CI26	452 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	CEBPB	P17676	345 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	ATF6	P18850	670 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	MYO1E	Q12965	1108 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	MORC3	Q14149	939 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	INTS6L	Q5JSJ4	861 aa	Known RBP	18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	THEM5	Q8N1Q8	247 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	CORO1B	Q9BR76	489 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	RPP25	Q9BUL9	199 aa	Known RBP	18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	HSFX1	Q9UBD0	423 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	CDH7	Q9ULB5	785 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	SORCS3	Q9UPU3	1222 aa		18.57	■□□□□ 0.56
MBD1-221	ENST00000589867	MYBPHL	A2RUH7	354 aa		18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	LRRN2	O75325	713 aa		18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	PTPN2	P17706	415 aa		18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	WARS	P23381	471 aa	Known RBP	18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	VAMP7	P51809	220 aa		18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	HTR4	Q13639	388 aa		18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	NCOA4	Q13772	614 aa		18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	FAM171B	Q6P995	826 aa		18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	TRIM67	Q6ZTA4	783 aa		18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	FAM186B	Q8IYM0	893 aa		18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	ING5	Q8WYH8	240 aa		18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	SDCBP2	Q9H190	292 aa		18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	ZNF334	Q9HCZ1	680 aa	Predicted RBP	18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	CRTAC1	Q9NQ79	661 aa		18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	FRMD4B	Q9Y2L6	1034 aa		18.56	■□□□□ 0.56
MBD1-221	ENST00000589867	IKBKB	O14920	756 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	TACC1	O75410	805 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	HAPLN1	P10915	354 aa	Predicted RBP	18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	ATIC	P31939	592 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	PSMC2	P35998	433 aa	Known RBP	18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	LHX1	P48742	406 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	GPR15	P49685	360 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	AP3M2	P53677	418 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	ENPEP	Q07075	957 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	WDR72	Q3MJ13	1102 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	TMEM31	Q5JXX7	168 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	FGF14	Q92915	247 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	DUSP9	Q99956	384 aa	Known RBP	18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	LPIN3	Q9BQK8	851 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	MKNK1	Q9BUB5	465 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	SMYD3	Q9H7B4	428 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	GTF3C4	Q9UKN8	822 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	MRPS23	Q9Y3D9	190 aa	Known RBP	18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	DENND4C	Q5VZ89	1909 aa		18.55	■□□□□ 0.56
MBD1-221	ENST00000589867	BIN1	O00499	593 aa		18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	NARS	O43776	548 aa	Known RBP	18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	GJA1	P17302	382 aa		18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	CCNE1	P24864	410 aa		18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	RPL13	P26373	211 aa	Known RBP	18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	BIRC3	Q13489	604 aa		18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	TTI2	Q6NXR4	508 aa		18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	PARM1	Q6UWI2	310 aa		18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	HFE2	Q6ZVN8	426 aa		18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	INTS8	Q75QN2	995 aa	Known RBP	18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	SLC44A3	Q8N4M1	653 aa		18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	SHKBP1	Q8TBC3	707 aa		18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	LMBRD1	Q9NUN5	540 aa		18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	ABI2	Q9NYB9	513 aa	Predicted RBP	18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	IGSF9	Q9P2J2	1179 aa		18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	HOOK1	Q9UJC3	728 aa	Known RBP	18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	GREB1	Q4ZG55	1949 aa		18.54	■□□□□ 0.56
MBD1-221	ENST00000589867	ASS1	P00966	412 aa	Known RBP	18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	HLA-DRA	P01903	254 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	PDGFRB	P09619	1106 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	FAM163B	P0C2L3	166 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	GCLM	P48507	274 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	CDH8	P55286	799 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	PSMC1	P62191	440 aa	Known RBP	18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	MYL7	Q01449	175 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	TSPY1	Q01534	308 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	SIGLEC14	Q08ET2	396 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	SMARCB1	Q12824	385 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	TRPC3	Q13507	836 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	CAMK4	Q16566	473 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	SPOPL	Q6IQ16	392 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	GAREM2	Q75VX8	874 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	DCP1B	Q8IZD4	617 aa	Known RBP	18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	STKLD1	Q8NE28	680 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	SPPL2B	Q8TCT7	592 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	TAS1R2	Q8TE23	839 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	C2orf15	Q8WU43	125 aa	Known RBP	18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	PSMG2	Q969U7	264 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	SYAP1	Q96A49	352 aa	Predicted RBP	18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	ZNF512	Q96ME7	567 aa	Predicted RBP	18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	ZSWIM3	Q96MP5	696 aa		18.53	■□□□□ 0.56
MBD1-221	ENST00000589867	MMS19	Q96T76	1030 aa		18.53	■□□□□ 0.56

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