RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ELF1P32519 619 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 MTHFRP42898 656 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 MYL7Q01449 175 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 SLC39A12Q504Y0 691 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 CYP26C1Q6V0L0 522 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 IRF2BP1Q8IU81 584 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 TRIM59Q8IWR1 403 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 ADAMTS19Q8TE59 1207 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 RIPOR3Q96MK2 946 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 NECAB3Q96P71 396 aaPredicted RBP21.64■■□□□ 1.05
DDX39A-207ENST00000588542 PKMYT1Q99640 499 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 SDCBP2Q9H190 292 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 SMYD3Q9H7B4 428 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 APOBEC3GQ9HC16 384 aaKnown RBP21.64■■□□□ 1.05
DDX39A-207ENST00000588542 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.64■■□□□ 1.051e-6■■■■■ 28.1
DDX39A-207ENST00000588542 TMLHEQ9NVH6 421 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 DACH1Q9UI36 760 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 COQ4Q9Y3A0 265 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 BDP1A6H8Y1 2624 aa21.64■■□□□ 1.05
DDX39A-207ENST00000588542 FGFR1OPO95684 399 aaKnown RBP21.63■■□□□ 1.05
DDX39A-207ENST00000588542 CDR1P51861 262 aa21.63■■□□□ 1.05
DDX39A-207ENST00000588542 CDH8P55286 799 aa21.63■■□□□ 1.05
DDX39A-207ENST00000588542 CT47A1Q5JQC4 288 aaPredicted RBP21.63■■□□□ 1.05
DDX39A-207ENST00000588542 INTS6LQ5JSJ4 861 aaKnown RBP21.63■■□□□ 1.05
DDX39A-207ENST00000588542 ATAT1Q5SQI0 421 aa21.63■■□□□ 1.05
DDX39A-207ENST00000588542 ATAD1Q8NBU5 361 aa21.63■■□□□ 1.05
DDX39A-207ENST00000588542 FBXL13Q8NEE6 735 aa21.63■■□□□ 1.05
DDX39A-207ENST00000588542 SMG7Q92540 1137 aaKnown RBP21.63■■□□□ 1.05
DDX39A-207ENST00000588542 NECTIN4Q96NY8 510 aa21.63■■□□□ 1.05
DDX39A-207ENST00000588542 INSL5Q9Y5Q6 135 aa21.63■■□□□ 1.05
DDX39A-207ENST00000588542 DOCK8Q8NF50 2099 aa21.63■■□□□ 1.05
DDX39A-207ENST00000588542 MUC3AQ02505 3323 aa21.63■■□□□ 1.05
DDX39A-207ENST00000588542 TTC28Q96AY4 2481 aa21.63■■□□□ 1.05
DDX39A-207ENST00000588542 PRRG1O14668 218 aa21.62■■□□□ 1.05
DDX39A-207ENST00000588542 CCL16O15467 120 aa21.62■■□□□ 1.05
DDX39A-207ENST00000588542 POU2F2P09086 479 aa21.62■■□□□ 1.05
DDX39A-207ENST00000588542 RAP1GAPP47736 663 aa21.62■■□□□ 1.05
DDX39A-207ENST00000588542 FMO5P49326 533 aa21.62■■□□□ 1.05
DDX39A-207ENST00000588542 TSPY1Q01534 308 aa21.62■■□□□ 1.05
DDX39A-207ENST00000588542 DUSP4Q13115 394 aa21.62■■□□□ 1.05
DDX39A-207ENST00000588542 CCDC142Q17RM4 750 aa21.62■■□□□ 1.05
DDX39A-207ENST00000588542 CAVIN1Q6NZI2 390 aaKnown RBP21.62■■□□□ 1.05
DDX39A-207ENST00000588542 SCARA5Q6ZMJ2 495 aa21.62■■□□□ 1.05
DDX39A-207ENST00000588542 DCP1BQ8IZD4 617 aaKnown RBP21.62■■□□□ 1.05
DDX39A-207ENST00000588542 TTC9BQ8N6N2 239 aa21.62■■□□□ 1.05
DDX39A-207ENST00000588542 PHF7Q9BWX1 381 aaPredicted RBP21.62■■□□□ 1.05
DDX39A-207ENST00000588542 RAB20Q9NX57 234 aa21.62■■□□□ 1.05
DDX39A-207ENST00000588542 PRKAG3Q9UGI9 489 aa21.62■■□□□ 1.05
DDX39A-207ENST00000588542 ATP2C2O75185 946 aa21.61■■□□□ 1.05
DDX39A-207ENST00000588542 PDGFRBP09619 1106 aa21.61■■□□□ 1.05
DDX39A-207ENST00000588542 PCSK1P29120 753 aa21.61■■□□□ 1.05
DDX39A-207ENST00000588542 GNL1P36915 607 aaPredicted RBP21.61■■□□□ 1.05
DDX39A-207ENST00000588542 ASPAP45381 313 aa21.61■■□□□ 1.05
DDX39A-207ENST00000588542 NOP14P78316 857 aaKnown RBP21.61■■□□□ 1.05
DDX39A-207ENST00000588542 ZP2Q05996 745 aa21.61■■□□□ 1.05
DDX39A-207ENST00000588542 KLHL40Q2TBA0 621 aa21.61■■□□□ 1.05
DDX39A-207ENST00000588542 FAM171BQ6P995 826 aa21.61■■□□□ 1.05
DDX39A-207ENST00000588542 SASS6Q6UVJ0 657 aa21.61■■□□□ 1.05
DDX39A-207ENST00000588542 ADHFE1Q8IWW8 467 aa21.61■■□□□ 1.05
DDX39A-207ENST00000588542 CNOT6LQ96LI5 555 aaKnown RBP21.61■■□□□ 1.05
DDX39A-207ENST00000588542 BCO2Q9BYV7 579 aa21.61■■□□□ 1.05
DDX39A-207ENST00000588542 SNX25Q9H3E2 840 aa21.61■■□□□ 1.05
DDX39A-207ENST00000588542 GTF3C4Q9UKN8 822 aa21.61■■□□□ 1.05
DDX39A-207ENST00000588542 CDH9Q9ULB4 789 aa21.61■■□□□ 1.05
DDX39A-207ENST00000588542 SLC27A5Q9Y2P5 690 aa21.61■■□□□ 1.05
DDX39A-207ENST00000588542 MYBPHLA2RUH7 354 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 C19orf67A6NJJ6 358 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 PMM2O15305 246 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 CLSTN1O94985 981 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 CCDC192P0DO97 292 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 P4HA1P13674 534 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 SMARCB1Q12824 385 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 C11orf57Q6ZUT1 292 aaPredicted RBP21.6■■□□□ 1.05
DDX39A-207ENST00000588542 OR6B3Q8NGW1 331 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 UHRF1Q96T88 793 aaPredicted RBP21.6■■□□□ 1.05
DDX39A-207ENST00000588542 SYT15Q9BQS2 421 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 IMPG2Q9BZV3 1241 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 PIDD1Q9HB75 910 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 WDR6Q9NNW5 1121 aaKnown RBP21.6■■□□□ 1.05
DDX39A-207ENST00000588542 CRTAC1Q9NQ79 661 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 HSFX1Q9UBD0 423 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 YIPF1Q9Y548 306 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 GREB1Q4ZG55 1949 aa21.6■■□□□ 1.05
DDX39A-207ENST00000588542 XYLBO75191 536 aa21.59■■□□□ 1.05
DDX39A-207ENST00000588542 LRG1P02750 347 aa21.59■■□□□ 1.05
DDX39A-207ENST00000588542 PTMSP20962 102 aa21.59■■□□□ 1.05
DDX39A-207ENST00000588542 PSMC1P62191 440 aaKnown RBP21.59■■□□□ 1.05
DDX39A-207ENST00000588542 TWF1Q12792 350 aa21.59■■□□□ 1.05
DDX39A-207ENST00000588542 KCNH2Q12809 1159 aa21.59■■□□□ 1.05
DDX39A-207ENST00000588542 STX1AQ16623 288 aa21.59■■□□□ 1.05
DDX39A-207ENST00000588542 TPD52L1Q16890 204 aaPredicted RBP21.59■■□□□ 1.05
DDX39A-207ENST00000588542 GRASPQ7Z6J2 395 aaPredicted RBP21.59■■□□□ 1.05
DDX39A-207ENST00000588542 SPPL2BQ8TCT7 592 aa21.59■■□□□ 1.05
DDX39A-207ENST00000588542 C2orf15Q8WU43 125 aaKnown RBP21.59■■□□□ 1.05
DDX39A-207ENST00000588542 COL25A1Q9BXS0 654 aaPredicted RBP21.59■■□□□ 1.05
DDX39A-207ENST00000588542 NIF3L1Q9GZT8 377 aa21.59■■□□□ 1.05
DDX39A-207ENST00000588542 DPEP3Q9H4B8 488 aa21.59■■□□□ 1.05
DDX39A-207ENST00000588542 THAP9Q9H5L6 903 aa21.59■■□□□ 1.05
DDX39A-207ENST00000588542 CD320Q9NPF0 282 aa21.59■■□□□ 1.05
DDX39A-207ENST00000588542 ANO10Q9NW15 660 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms