RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 P4HA1P13674 534 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 SSTR3P32745 418 aaPredicted RBP21.74■■□□□ 1.07
ATG4D-204ENST00000586417 RANBP2P49792 3224 aaKnown RBP21.74■■□□□ 1.07
ATG4D-204ENST00000586417 RAD23BP54727 409 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 PTPROQ16827 1216 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 C11orf63Q6NUN7 778 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 NOA1Q8NC60 698 aaKnown RBP21.74■■□□□ 1.07
ATG4D-204ENST00000586417 BEST2Q8NFU1 509 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 HES6Q96HZ4 224 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 IL23AQ9NPF7 189 aa21.74■■□□□ 1.07
ATG4D-204ENST00000586417 AVENQ9NQS1 362 aaPredicted RBP21.74■■□□□ 1.07
ATG4D-204ENST00000586417 CNOT8Q9UFF9 292 aaKnown RBP21.74■■□□□ 1.07
ATG4D-204ENST00000586417 UBQLN1Q9UMX0 589 aaKnown RBP21.74■■□□□ 1.07
ATG4D-204ENST00000586417 CILPO75339 1184 aa21.73■■□□□ 1.07
ATG4D-204ENST00000586417 NSFP46459 744 aaKnown RBP21.73■■□□□ 1.07
ATG4D-204ENST00000586417 DNA2P51530 1060 aa21.73■■□□□ 1.07
ATG4D-204ENST00000586417 FPGSQ05932 587 aa21.73■■□□□ 1.07
ATG4D-204ENST00000586417 IKBKEQ14164 716 aa21.73■■□□□ 1.07
ATG4D-204ENST00000586417 TWNKQ96RR1 684 aa21.73■■□□□ 1.07
ATG4D-204ENST00000586417 TSPAN18Q96SJ8 248 aa21.73■■□□□ 1.07
ATG4D-204ENST00000586417 NUP85Q9BW27 656 aa21.73■■□□□ 1.07
ATG4D-204ENST00000586417 EPC1Q9H2F5 836 aa21.73■■□□□ 1.07
ATG4D-204ENST00000586417 EHD2Q9NZN4 543 aa21.73■■□□□ 1.07
ATG4D-204ENST00000586417 UVRAGQ9P2Y5 699 aa21.73■■□□□ 1.07
ATG4D-204ENST00000586417 HMGXB4Q9UGU5 601 aa21.73■■□□□ 1.07
ATG4D-204ENST00000586417 PCDHGC3Q9UN70 934 aa21.73■■□□□ 1.07
ATG4D-204ENST00000586417 CES2O00748 559 aa21.72■■□□□ 1.07
ATG4D-204ENST00000586417 PAEPP09466 180 aa21.72■■□□□ 1.07
ATG4D-204ENST00000586417 MYBL1P10243 752 aa21.72■■□□□ 1.07
ATG4D-204ENST00000586417 INCA1Q0VD86 236 aa21.72■■□□□ 1.07
ATG4D-204ENST00000586417 PTP4A2Q12974 167 aa21.72■■□□□ 1.07
ATG4D-204ENST00000586417 PHF13Q86YI8 300 aaPredicted RBP21.72■■□□□ 1.07
ATG4D-204ENST00000586417 LRRC52Q8N7C0 313 aa21.72■■□□□ 1.07
ATG4D-204ENST00000586417 SLC4A11Q8NBS3 891 aa21.72■■□□□ 1.07
ATG4D-204ENST00000586417 ZNF564Q8TBZ8 553 aaPredicted RBP21.72■■□□□ 1.07
ATG4D-204ENST00000586417 TRIM11Q96F44 468 aa21.72■■□□□ 1.07
ATG4D-204ENST00000586417 RPGRIP1Q96KN7 1286 aa21.72■■□□□ 1.07
ATG4D-204ENST00000586417 GAD1Q99259 594 aa21.72■■□□□ 1.07
ATG4D-204ENST00000586417 ELOVL4Q9GZR5 314 aa21.72■■□□□ 1.07
ATG4D-204ENST00000586417 FAM124BQ9H5Z6 455 aaPredicted RBP21.72■■□□□ 1.07
ATG4D-204ENST00000586417 LSM8O95777 96 aaKnown RBP21.71■■□□□ 1.07
ATG4D-204ENST00000586417 MLH1P40692 756 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 TUBB4BP68371 445 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 MYO1EQ12965 1108 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 C9orf57Q5W0N0 161 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 OTOP2Q7RTS6 562 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 CRIPAKQ8N1N5 446 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 GSTCDQ8NEC7 633 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 MIOSQ9NXC5 875 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 SMARCAL1Q9NZC9 954 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 AMFRQ9UKV5 643 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 ARL5CA6NH57 179 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 FGFR1P11362 822 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 SKIP12755 728 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 RRM1P23921 792 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 TNNC1P63316 161 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 ITIH3Q06033 890 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 PPP1R2P3Q6NXS1 205 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 GPR161Q8N6U8 529 aaKnown RBP21.71■■□□□ 1.07
ATG4D-204ENST00000586417 MS4A14Q96JA4 679 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 VCPIP1Q96JH7 1222 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 RNF14Q9UBS8 474 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 ALG6Q9Y672 507 aa21.71■■□□□ 1.07
ATG4D-204ENST00000586417 KCNK3O14649 394 aa21.7■■□□□ 1.06
ATG4D-204ENST00000586417 PTGESO14684 152 aa21.7■■□□□ 1.06
ATG4D-204ENST00000586417 DDX3YO15523 660 aaKnown RBP21.7■■□□□ 1.06
ATG4D-204ENST00000586417 EOMESO95936 686 aa21.7■■□□□ 1.06
ATG4D-204ENST00000586417 CDH5P33151 784 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-204ENST00000586417 SOX4Q06945 474 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-204ENST00000586417 C1QBPQ07021 282 aaKnown RBP21.7■■□□□ 1.06
ATG4D-204ENST00000586417 PPIGQ13427 754 aaKnown RBP eCLIP21.7■■□□□ 1.062e-6■■□□□ 14.2
ATG4D-204ENST00000586417 C2CD6Q53TS8 623 aa21.7■■□□□ 1.06
ATG4D-204ENST00000586417 CLLU1OSQ5K130 101 aa21.7■■□□□ 1.06
ATG4D-204ENST00000586417 ZNF365Q70YC5 407 aa21.7■■□□□ 1.06
ATG4D-204ENST00000586417 TMCO2Q7Z6W1 182 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-204ENST00000586417 PGBD4Q96DM1 585 aa21.7■■□□□ 1.06
ATG4D-204ENST00000586417 C11orf70Q9BRQ4 267 aa21.7■■□□□ 1.06
ATG4D-204ENST00000586417 RSAD1Q9HA92 442 aa21.7■■□□□ 1.06
ATG4D-204ENST00000586417 BARX2Q9UMQ3 279 aaPredicted RBP21.7■■□□□ 1.06
ATG4D-204ENST00000586417 ABHD14A-ACY1A0A1B0GW23 586 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 PIRO00625 290 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 PFKMP08237 780 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 CYP3A5P20815 502 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 MMP8P22894 467 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 ORC1Q13415 861 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 LLGL2Q6P1M3 1020 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 HACE1Q8IYU2 909 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 WDTC1Q8N5D0 677 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 TMEM176AQ96HP8 235 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 ANKZF1Q9H8Y5 726 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 TMEM161AQ9NX61 479 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 ADAM22Q9P0K1 906 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 GIT1Q9Y2X7 761 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 PTPRSQ13332 1948 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 GATMP50440 423 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 DEFB103AP81534 67 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 RBM10P98175 930 aaKnown RBP21.69■■□□□ 1.06
ATG4D-204ENST00000586417 CFAP221Q4G0U5 840 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 CCDC181Q5TID7 509 aa21.69■■□□□ 1.06
ATG4D-204ENST00000586417 MMS22LQ6ZRQ5 1243 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms