RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 HDDC3Q8N4P3 179 aa9.17□□□□□ -0.94
SRSF1-207ENST00000584668 SPPL2BQ8TCT7 592 aa9.17□□□□□ -0.94
SRSF1-207ENST00000584668 GATA6Q92908 595 aa9.17□□□□□ -0.94
SRSF1-207ENST00000584668 CD101Q93033 1021 aa9.17□□□□□ -0.94
SRSF1-207ENST00000584668 MKNK1Q9BUB5 465 aa9.17□□□□□ -0.94
SRSF1-207ENST00000584668 EBF3Q9H4W6 596 aa9.17□□□□□ -0.94
SRSF1-207ENST00000584668 GKN1Q9NS71 199 aa9.17□□□□□ -0.94
SRSF1-207ENST00000584668 GJB4Q9NTQ9 266 aa9.17□□□□□ -0.94
SRSF1-207ENST00000584668 TDP1Q9NUW8 608 aa9.17□□□□□ -0.94
SRSF1-207ENST00000584668 LRWD1Q9UFC0 647 aa9.17□□□□□ -0.94
SRSF1-207ENST00000584668 NOL7Q9UMY1 257 aaKnown RBP9.17□□□□□ -0.94
SRSF1-207ENST00000584668 KIAA1024Q9UPX6 916 aa9.17□□□□□ -0.94
SRSF1-207ENST00000584668 SLC27A5Q9Y2P5 690 aa9.17□□□□□ -0.94
SRSF1-207ENST00000584668 TIMM13Q9Y5L4 95 aaPredicted RBP9.17□□□□□ -0.94
SRSF1-207ENST00000584668 FASNP49327 2511 aaKnown RBP9.17□□□□□ -0.94
SRSF1-207ENST00000584668 PKD1L2Q7Z442 2459 aa9.17□□□□□ -0.94
SRSF1-207ENST00000584668 HELZP42694 1942 aaKnown RBP9.16□□□□□ -0.94
SRSF1-207ENST00000584668 EIF4E1BA6NMX2 242 aaKnown RBP9.16□□□□□ -0.94
SRSF1-207ENST00000584668 HIP1RO75146 1068 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 CXCL8P10145 99 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 ABCD1P33897 745 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 DHPSP49366 369 aaPredicted RBP9.16□□□□□ -0.94
SRSF1-207ENST00000584668 AARSP49588 968 aaKnown RBP eCLIP9.16□□□□□ -0.94
SRSF1-207ENST00000584668 FXR2P51116 673 aaKnown RBP eCLIP9.16□□□□□ -0.94
SRSF1-207ENST00000584668 CACNB1Q02641 598 aaPredicted RBP9.16□□□□□ -0.94
SRSF1-207ENST00000584668 HNRNPDQ14103 355 aaKnown RBP9.16□□□□□ -0.94
SRSF1-207ENST00000584668 ZNF268Q14587 947 aaPredicted RBP9.16□□□□□ -0.94
SRSF1-207ENST00000584668 SLC10A6Q3KNW5 377 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 SLC39A12Q504Y0 691 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 WDR44Q5JSH3 913 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 KRT79Q5XKE5 535 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 PKN3Q6P5Z2 889 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 LPCAT2Q7L5N7 544 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 RABEPKQ7Z6M1 372 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 GPIHBP1Q8IV16 184 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 DCP1BQ8IZD4 617 aaKnown RBP9.16□□□□□ -0.94
SRSF1-207ENST00000584668 ATAD1Q8NBU5 361 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 SNX29Q8TEQ0 813 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 LPIN3Q9BQK8 851 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 FAM83CQ9BQN1 747 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 TMEM60Q9H2L4 133 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 DDX19AQ9NUU7 478 aaKnown RBP9.16□□□□□ -0.94
SRSF1-207ENST00000584668 EVLQ9UI08 416 aaPredicted RBP9.16□□□□□ -0.94
SRSF1-207ENST00000584668 MSRB2Q9Y3D2 182 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 ANK1P16157 1881 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 LAMA5O15230 3695 aa9.16□□□□□ -0.94
SRSF1-207ENST00000584668 GIPC1O14908 333 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 SLC16A4O15374 487 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 MAP3K13O43283 966 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 LARGE1O95461 756 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 NFATC1O95644 943 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 CSH1P0DML2 217 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 CSH2P0DML3 217 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 SPINK2P20155 84 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 HOXD12P35452 270 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 TRAPPC10P48553 1259 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 LIG4P49917 911 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 TSPY1Q01534 308 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 RING1Q06587 406 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 MCL1Q07820 350 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 MTF1Q14872 753 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 TRIM61Q5EBN2 209 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 KIAA1211LQ6NV74 962 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 KCTD17Q8N5Z5 321 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 MAB21L3Q8N8X9 362 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 FSIP1Q8NA03 581 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 DEFB124Q8NES8 71 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 GTF3C6Q969F1 213 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 CNOT6LQ96LI5 555 aaKnown RBP9.15□□□□□ -0.94
SRSF1-207ENST00000584668 CRISPLD1Q9H336 500 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 TMEM206Q9H813 350 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 ECT2Q9H8V3 914 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 RPF1Q9H9Y2 349 aaKnown RBP9.15□□□□□ -0.94
SRSF1-207ENST00000584668 HPS4Q9NQG7 708 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 DUS2Q9NX74 493 aaKnown RBP9.15□□□□□ -0.94
SRSF1-207ENST00000584668 KCND2Q9NZV8 630 aa9.15□□□□□ -0.94
SRSF1-207ENST00000584668 LARSQ9P2J5 1176 aaKnown RBP9.15□□□□□ -0.94
SRSF1-207ENST00000584668 CIZ1Q9ULV3 898 aaPredicted RBP9.15□□□□□ -0.94
SRSF1-207ENST00000584668 DSPP15924 2871 aaKnown RBP9.14□□□□□ -0.95
SRSF1-207ENST00000584668 DMXL2Q8TDJ6 3036 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 PLXND1Q9Y4D7 1925 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 TRAV19A0A0A6YYK7 116 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 TTC26A0AVF1 554 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 LAD1O00515 517 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 HNRNPDLO14979 420 aaKnown RBP9.14□□□□□ -0.95
SRSF1-207ENST00000584668 DCLK1O15075 740 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 SOAT2O75908 522 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 SEC24BO95487 1268 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 VNN2O95498 520 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 CKMP06732 381 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 USP17L7P0C7H9 530 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 PLS3P13797 630 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 GJA4P35212 333 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 GALK1P51570 392 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 FOSBP53539 338 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 LILRA4P59901 499 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 FAM160A1Q05DH4 1040 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 PDIA5Q14554 519 aa9.14□□□□□ -0.95
SRSF1-207ENST00000584668 NFE2Q16621 373 aaPredicted RBP9.14□□□□□ -0.95
SRSF1-207ENST00000584668 ZNF423Q2M1K9 1284 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms