RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 CDH9Q9ULB4 789 aa9.21□□□□□ -0.94
PPP4R1-210ENST00000578557 RALGAPA2Q2PPJ7 1873 aa9.21□□□□□ -0.94
PPP4R1-210ENST00000578557 GOLGA8IPA6NC78 632 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 GOLGA8JA6NMD2 632 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 TRIM66O15016 1216 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 CLIC2O15247 247 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 DCXO43602 365 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 MBD3O95983 291 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 DLATP10515 647 aaKnown RBP9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 PFKLP17858 780 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 WEE1P30291 646 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 POLR2BP30876 1174 aaKnown RBP9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 PDE6CP51160 858 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 TNNC1P63316 161 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 BFSP1Q12934 665 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 PNOCQ13519 176 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 ZACNQ401N2 412 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 CFAP221Q4G0U5 840 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 WDR44Q5JSH3 913 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 RARS2Q5T160 578 aaKnown RBP9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 CEP135Q66GS9 1140 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 KRT39Q6A163 491 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 PRSS55Q6UWB4 352 aaPredicted RBP9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 VSTM1Q6UX27 236 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 TMC5Q6UXY8 1006 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 UNC93AQ86WB7 457 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 EFCAB13Q8IY85 973 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 FAM186BQ8IYM0 893 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 GRAMD1CQ8IYS0 662 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 KIAA1958Q8N8K9 716 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 TDRD5Q8NAT2 981 aaKnown RBP9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 HPS3Q969F9 1004 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 PRRX2Q99811 253 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 ZCWPW1Q9H0M4 648 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 KCNH6Q9H252 994 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 SNX25Q9H3E2 840 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 CYP3A43Q9HB55 503 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 CYP4F11Q9HBI6 524 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 COMMD8Q9NX08 183 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 UXTQ9UBK9 157 aaPredicted RBP9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 PCDHB5Q9Y5E4 795 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 TRANK1O15050 2925 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 CHD7Q9P2D1 2997 aa9.2□□□□□ -0.94
PPP4R1-210ENST00000578557 SIP14410 1827 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 WDR27A2RRH5 827 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 TISP43B9A030 160 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 GPR37L1O60883 481 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 LETM1O95202 739 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 C4BPAP04003 597 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 CSH1P0DML2 217 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 CSH2P0DML3 217 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 CCDC192P0DO97 292 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 IL9P15248 144 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 WARSP23381 471 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 DDX6P26196 483 aaKnown RBP eCLIP9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 ERCC5P28715 1186 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 CASP1P29466 404 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 GNL1P36915 607 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 PRCPP42785 496 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 MAGEA11P43364 429 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 YWHAEP62258 255 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 SPAG1Q07617 926 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 ADCY1Q08828 1119 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 NCOA4Q13772 614 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 MORC3Q14149 939 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 WDR72Q3MJ13 1102 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 ZCWPW2Q504Y3 356 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 ZNF667Q5HYK9 610 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 C1orf228Q6PIY5 440 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 BMP8AQ7Z5Y6 402 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 ZC3H3Q8IXZ2 948 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 GLIS3Q8NEA6 775 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 CXorf38Q8TB03 319 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 SLC7A14Q8TBB6 771 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 NOC3LQ8WTT2 800 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 RABGGTAQ92696 567 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 JAKMIP2Q96AA8 810 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 CCDC127Q96BQ5 260 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 MMS19Q96T76 1030 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 TMUB1Q9BVT8 246 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 PRR14Q9BWN1 585 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 FGFBP2Q9BYJ0 223 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 MTMR12Q9C0I1 747 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 CXCL16Q9H2A7 254 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 TMEM8AQ9HCN3 771 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 ARMCX3Q9UH62 379 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 CDH7Q9ULB5 785 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 SORCS3Q9UPU3 1222 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 PCDHGC5Q9Y5F6 944 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 SNX9Q9Y5X1 595 aa9.19□□□□□ -0.94
PPP4R1-210ENST00000578557 F8W810 466 aa9.18□□□□□ -0.94
PPP4R1-210ENST00000578557 ATP8B3O60423 1300 aa9.18□□□□□ -0.94
PPP4R1-210ENST00000578557 AKAP3O75969 853 aa9.18□□□□□ -0.94
PPP4R1-210ENST00000578557 CST3P01034 146 aaPredicted RBP9.18□□□□□ -0.94
PPP4R1-210ENST00000578557 FSHRP23945 695 aa9.18□□□□□ -0.94
PPP4R1-210ENST00000578557 CDC25CP30307 473 aa9.18□□□□□ -0.94
PPP4R1-210ENST00000578557 EPHA5P54756 1037 aa9.18□□□□□ -0.94
PPP4R1-210ENST00000578557 MARSP56192 900 aaKnown RBP9.18□□□□□ -0.94
PPP4R1-210ENST00000578557 BIRC3Q13489 604 aa9.18□□□□□ -0.94
PPP4R1-210ENST00000578557 MTMR3Q13615 1198 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms