RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 LIMK1P53667 647 aa11.11□□□□□ -0.63
BBS4-205ENST00000562219 PTPAQ15257 358 aa11.11□□□□□ -0.63
BBS4-205ENST00000562219 TAF12Q16514 161 aa11.11□□□□□ -0.63
BBS4-205ENST00000562219 AASDHQ4L235 1098 aaPredicted RBP11.11□□□□□ -0.63
BBS4-205ENST00000562219 ARL6IP4Q66PJ3 421 aaKnown RBP11.11□□□□□ -0.63
BBS4-205ENST00000562219 MCTP1Q6DN14 999 aa11.11□□□□□ -0.63
BBS4-205ENST00000562219 IL31Q6EBC2 164 aa11.11□□□□□ -0.63
BBS4-205ENST00000562219 GPBP1Q86WP2 473 aa11.11□□□□□ -0.63
BBS4-205ENST00000562219 C2orf15Q8WU43 125 aaKnown RBP11.11□□□□□ -0.63
BBS4-205ENST00000562219 GAB3Q8WWW8 586 aa11.11□□□□□ -0.63
BBS4-205ENST00000562219 FAM212AQ96EL1 285 aa11.11□□□□□ -0.63
BBS4-205ENST00000562219 LOXL4Q96JB6 756 aa11.11□□□□□ -0.63
BBS4-205ENST00000562219 ZCWPW1Q9H0M4 648 aa11.11□□□□□ -0.63
BBS4-205ENST00000562219 CPSF3Q9UKF6 684 aaKnown RBP11.11□□□□□ -0.63
BBS4-205ENST00000562219 C2CD2Q9Y426 696 aa11.11□□□□□ -0.63
BBS4-205ENST00000562219 KIF3AQ9Y496 699 aa11.11□□□□□ -0.63
BBS4-205ENST00000562219 CFAP47Q6ZTR5 3102 aa11.11□□□□□ -0.63
BBS4-205ENST00000562219 CCDC163A0A0D9SF12 145 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 EXTL3O43909 919 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 ATG13O75143 517 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 RPP40O75818 363 aaKnown RBP11.1□□□□□ -0.63
BBS4-205ENST00000562219 FAM13AO94988 1023 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 EPN2O95208 641 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 KCNA4P22459 653 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 HOXC13P31276 330 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 ABCD1P33897 745 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 SMARCB1Q12824 385 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 GRSF1Q12849 480 aaKnown RBP eCLIP11.1□□□□□ -0.63
BBS4-205ENST00000562219 TMEM196Q5HYL7 178 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 SLC39A4Q6P5W5 647 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 PKN3Q6P5Z2 889 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 METTL23Q86XA0 190 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 CMTM8Q8IZV2 173 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 MYCT1Q8N699 235 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 C12orf50Q8NA57 414 aaPredicted RBP11.1□□□□□ -0.63
BBS4-205ENST00000562219 SPPL2BQ8TCT7 592 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 AK8Q96MA6 479 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 FAM83CQ9BQN1 747 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 SLC46A2Q9BY10 475 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 SMG9Q9H0W8 520 aaKnown RBP11.1□□□□□ -0.63
BBS4-205ENST00000562219 ARRDC1-AS1Q9H2J1 176 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 ASB7Q9H672 318 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 PARVGQ9HBI0 331 aa11.1□□□□□ -0.63
BBS4-205ENST00000562219 CYB561D2O14569 222 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 TRDMT1O14717 391 aaKnown RBP11.09□□□□□ -0.63
BBS4-205ENST00000562219 TRAK2O60296 914 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 TBCAO75347 108 aaKnown RBP11.09□□□□□ -0.63
BBS4-205ENST00000562219 AKAP3O75969 853 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 KRT18P05783 430 aaKnown RBP11.09□□□□□ -0.63
BBS4-205ENST00000562219 ZNF806P0C7X5 589 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 CCDC192P0DO97 292 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 DDX6P26196 483 aaKnown RBP eCLIP11.09□□□□□ -0.63
BBS4-205ENST00000562219 NMT1P30419 496 aaKnown RBP11.09□□□□□ -0.63
BBS4-205ENST00000562219 AVPR1AP37288 418 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 RAP1GAPP47736 663 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 TAF6P49848 677 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 CDR1P51861 262 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 NLRP12P59046 1061 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 BFSP1Q12934 665 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 RUNX3Q13761 415 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 SF3A2Q15428 464 aaKnown RBP11.09□□□□□ -0.63
BBS4-205ENST00000562219 FSTL4Q6MZW2 842 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 CACNA2D4Q7Z3S7 1137 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 KBTBD6Q86V97 674 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 THEM5Q8N1Q8 247 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 CHFRQ96EP1 664 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 CALML4Q96GE6 196 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 KIF2CQ99661 725 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 PYM1Q9BRP8 204 aaKnown RBP11.09□□□□□ -0.63
BBS4-205ENST00000562219 CCSER1Q9C0I3 900 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 EBF3Q9H4W6 596 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 KIF9Q9HAQ2 790 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 HPS4Q9NQG7 708 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 GKN1Q9NS71 199 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 PPP4R2Q9NY27 417 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 ABI2Q9NYB9 513 aaPredicted RBP11.09□□□□□ -0.63
BBS4-205ENST00000562219 SLC8A2Q9UPR5 921 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 CCL26Q9Y258 94 aa11.09□□□□□ -0.63
BBS4-205ENST00000562219 ZFHX4Q86UP3 3567 aa11.08□□□□□ -0.63
BBS4-205ENST00000562219 CEP192Q8TEP8 1941 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 PLXND1Q9Y4D7 1925 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 TNRC6BQ9UPQ9 1833 aaKnown RBP11.08□□□□□ -0.64
BBS4-205ENST00000562219 OTOL1A6NHN0 477 aaPredicted RBP11.08□□□□□ -0.64
BBS4-205ENST00000562219 SOBPA7XYQ1 873 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 AXIN1O15169 862 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 HAPLN1P10915 354 aaPredicted RBP11.08□□□□□ -0.64
BBS4-205ENST00000562219 UBA7P41226 1012 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 PXNP49023 591 aaPredicted RBP11.08□□□□□ -0.64
BBS4-205ENST00000562219 ACOT2P49753 483 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 GTF2BQ00403 316 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 AMPD2Q01433 879 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 DHX8Q14562 1220 aaKnown RBP11.08□□□□□ -0.64
BBS4-205ENST00000562219 CCDC6Q16204 474 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 SV2CQ496J9 727 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 WSCD1Q658N2 575 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 TRIM68Q6AZZ1 485 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 ADALQ6DHV7 355 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 TMEM150AQ86TG1 271 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 LRRTM3Q86VH5 581 aa11.08□□□□□ -0.64
BBS4-205ENST00000562219 DCP1BQ8IZD4 617 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms