RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 DRICH1Q6PGQ1 229 aaPredicted RBP11.94□□□□□ -0.5
CLPX-204ENST00000559152 POLNQ7Z5Q5 900 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 CDR2LQ86X02 465 aaPredicted RBP11.94□□□□□ -0.5
CLPX-204ENST00000559152 WDTC1Q8N5D0 677 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 OR6J1Q8NGC5 347 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 TFAP2BQ92481 460 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 PGM2Q96G03 612 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 CCDC114Q96M63 670 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 TRAIPQ9BWF2 469 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 CNOT10Q9H9A5 744 aaKnown RBP11.94□□□□□ -0.5
CLPX-204ENST00000559152 PLEKHA5Q9HAU0 1116 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 GBA2Q9HCG7 927 aaPredicted RBP11.94□□□□□ -0.5
CLPX-204ENST00000559152 CHST7Q9NS84 486 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 BCCIPQ9P287 314 aaKnown RBP eCLIP11.94□□□□□ -0.5
CLPX-204ENST00000559152 DERAQ9Y315 318 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 PCNTO95613 3336 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 SIGLEC16A6NMB1 481 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 VTNP04004 478 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 HMGCRP04035 888 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 VDRP11473 427 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 KRT3P12035 628 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 ATP1A2P50993 1020 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 RAD23BP54727 409 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 SLC10A6Q3KNW5 377 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 SCARA3Q6AZY7 606 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 BCAS4Q8TDM0 211 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 ZBTB10Q96DT7 871 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 TMEM176AQ96HP8 235 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 HPDLQ96IR7 371 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 FOXP3Q9BZS1 431 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 ROPN1BQ9BZX4 212 aaPredicted RBP11.93□□□□□ -0.5
CLPX-204ENST00000559152 SYNCQ9H7C4 482 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 ROPN1Q9HAT0 212 aaPredicted RBP11.93□□□□□ -0.5
CLPX-204ENST00000559152 POLIQ9UNA4 740 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 EFR3BQ9Y2G0 817 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 GRIN2DO15399 1336 aa11.93□□□□□ -0.5
CLPX-204ENST00000559152 TSPAN1O60635 241 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 CILPO75339 1184 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 KRT7P08729 469 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 SMPD1P17405 629 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 ADCY8P40145 1251 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 GRM5P41594 1212 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 PPP2R2AP63151 447 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 PTPN11Q06124 597 aaPredicted RBP11.92□□□□□ -0.5
CLPX-204ENST00000559152 ZNF268Q14587 947 aaPredicted RBP11.92□□□□□ -0.5
CLPX-204ENST00000559152 ACAP1Q15027 740 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 STILQ15468 1287 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 HADHQ16836 314 aaKnown RBP11.92□□□□□ -0.5
CLPX-204ENST00000559152 MAP1SQ66K74 1059 aaPredicted RBP11.92□□□□□ -0.5
CLPX-204ENST00000559152 TMEM192Q8IY95 271 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 CPB2Q96IY4 423 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 HEMGNQ9BXL5 484 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 FRMD8P1Q9BZ68 369 aaPredicted RBP11.92□□□□□ -0.5
CLPX-204ENST00000559152 GCOM2Q9BZD3 368 aaPredicted RBP11.92□□□□□ -0.5
CLPX-204ENST00000559152 FAM107BQ9H098 131 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 RIPK2O43353 540 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 KRT1P04264 644 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 HPDP32754 393 aaPredicted RBP11.92□□□□□ -0.5
CLPX-204ENST00000559152 LSP1P33241 339 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 MYO1EQ12965 1108 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 PDCLQ13371 301 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 SLC29A2Q14542 456 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 CNGA2Q16280 664 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 SPRYD7Q5W111 196 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 DENND1BQ6P3S1 775 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 KIAA0319LQ8IZA0 1049 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 RNF25Q96BH1 459 aaPredicted RBP11.92□□□□□ -0.5
CLPX-204ENST00000559152 SLITRK1Q96PX8 696 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 EPN3Q9H201 632 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 DPP3Q9NY33 737 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 NOVA2Q9UNW9 492 aaKnown RBP11.92□□□□□ -0.5
CLPX-204ENST00000559152 NRCAMQ92823 1304 aa11.92□□□□□ -0.5
CLPX-204ENST00000559152 PLXNB2O15031 1838 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.91□□□□□ -0.5
CLPX-204ENST00000559152 EBAG9O00559 213 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 GJC1P36383 396 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 PSMC1P62191 440 aaKnown RBP11.91□□□□□ -0.5
CLPX-204ENST00000559152 TFDP3Q5H9I0 405 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 MARCH8Q5T0T0 291 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 GSTA5Q7RTV2 222 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 SPATS2Q86XZ4 545 aaKnown RBP11.91□□□□□ -0.5
CLPX-204ENST00000559152 SLC4A11Q8NBS3 891 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 CXorf38Q8TB03 319 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 ATG4AQ8WYN0 398 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 TLCD1Q96CP7 247 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 EPB41L4BQ9H329 900 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 SEMA4AQ9H3S1 761 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 ANAPC5Q9UJX4 755 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 BARX2Q9UMQ3 279 aaPredicted RBP11.91□□□□□ -0.5
CLPX-204ENST00000559152 AGAP1Q9UPQ3 857 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 DRG1Q9Y295 367 aaKnown RBP11.91□□□□□ -0.5
CLPX-204ENST00000559152 F8VP50 259 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 AGTP01019 485 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 PSMA2P25787 234 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 RAP1GAPP47736 663 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 CDH8P55286 799 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 MAGOHP61326 146 aaKnown RBP11.91□□□□□ -0.5
CLPX-204ENST00000559152 INCA1Q0VD86 236 aa11.91□□□□□ -0.5
CLPX-204ENST00000559152 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
CLPX-204ENST00000559152 LLGL1Q15334 1064 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms