RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 SLC36A4Q6YBV0 504 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 ZNF589Q86UQ0 364 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-245ENST00000556958 TTC30AQ86WT1 665 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 KSR1Q8IVT5 923 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 ZNF513Q8N8E2 541 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-245ENST00000556958 DAGLBQ8NCG7 672 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 ENGASEQ8NFI3 743 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 SHKBP1Q8TBC3 707 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 PRPF31Q8WWY3 499 aaKnown RBP6.35□□□□□ -1.39
ATXN3-245ENST00000556958 PSPC1Q8WXF1 523 aaKnown RBP6.35□□□□□ -1.39
ATXN3-245ENST00000556958 SLC7A3Q8WY07 619 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 FNBP1Q96RU3 617 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 PAAF1Q9BRP4 392 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 ARHGAP9Q9BRR9 750 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 ANO3Q9BYT9 981 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 DCTPP1Q9H773 170 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 FSCN3Q9NQT6 498 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 CEP72Q9P209 647 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 SUSD2Q9UGT4 822 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 PAXBP1Q9Y5B6 917 aa6.35□□□□□ -1.39
ATXN3-245ENST00000556958 NCANO14594 1321 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 FAM86B1E9PN63 330 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 TMEM189-UBE2V1I3L0A0 370 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 DKK1O94907 266 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 SEC24AO95486 1093 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 FAM86B2P0C5J1 330 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 ATXN1LP0C7T5 689 aaKnown RBP6.34□□□□□ -1.39
ATXN3-245ENST00000556958 JUPP14923 745 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 MX1P20591 662 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 HNF1BP35680 557 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 JAK3P52333 1124 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 EPHB3P54753 998 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 TLE3Q04726 772 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 ZNF33AQ06730 810 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 TWF1Q12792 350 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 NMIQ13287 307 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-245ENST00000556958 PLD1Q13393 1074 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 LY6DQ14210 128 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 CRY1Q16526 586 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 PLEKHG6Q3KR16 790 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 SYCP2LQ5T4T6 812 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 CC2D1AQ6P1N0 951 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-245ENST00000556958 ATG14Q6ZNE5 492 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 HEATR3Q7Z4Q2 680 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 MEIOBQ8N635 442 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 ZNF511Q8NB15 262 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 GALNT6Q8NCL4 622 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 MDGA1Q8NFP4 955 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 OR2I1PQ8NGU4 316 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 RHBDD1Q8TEB9 315 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 RLN3Q8WXF3 142 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 GLMNQ92990 594 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 CCDC97Q96F63 343 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-245ENST00000556958 LRRC3BQ96PB8 259 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 FAM83CQ9BQN1 747 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 ATXN3LQ9H3M9 355 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 MINDY3Q9H8M7 445 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 PRDM16Q9HAZ2 1276 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 FBRSL1Q9HCM7 1045 aaKnown RBP6.34□□□□□ -1.39
ATXN3-245ENST00000556958 RIC8AQ9NPQ8 531 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 KLK14Q9P0G3 267 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 BCCIPQ9P287 314 aaKnown RBP eCLIP6.34□□□□□ -1.39
ATXN3-245ENST00000556958 AFF4Q9UHB7 1163 aaKnown RBP6.34□□□□□ -1.39
ATXN3-245ENST00000556958 ZMYM5Q9UJ78 669 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 PPME1Q9Y570 386 aa6.34□□□□□ -1.39
ATXN3-245ENST00000556958 ATXN2Q99700 1313 aaKnown RBP6.33□□□□□ -1.4
ATXN3-245ENST00000556958 FAM149AA5PLN7 773 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 PLK4O00444 970 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 TNFSF14O43557 240 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 TLX3O43711 291 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-245ENST00000556958 CYP3A4P08684 503 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 ZNF883P0CG24 379 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 CDK4P11802 303 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 ACTN2P35609 894 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 ALDH1A3P47895 512 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 ADCY7P51828 1080 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 TMPRSS3P57727 454 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 RPL6Q02878 288 aaKnown RBP6.33□□□□□ -1.4
ATXN3-245ENST00000556958 LAMTOR4Q0VGL1 99 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 PDGFRLQ15198 375 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.33□□□□□ -1.4
ATXN3-245ENST00000556958 GPR158Q5T848 1215 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 SLC27A1Q6PCB7 646 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 MARCH9Q86YJ5 346 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 PGBD3Q8N328 593 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 CCDC82Q8N4S0 544 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 RNF149Q8NC42 400 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 RDM1Q8NG50 284 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 USP33Q8TEY7 942 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 TCP11Q8WWU5 503 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 CD101Q93033 1021 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 CHFRQ96EP1 664 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 TMEM176AQ96HP8 235 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 UROC1Q96N76 676 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 CEP89Q96ST8 783 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 DSCC1Q9BVC3 393 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 SEMA4CQ9C0C4 833 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 NRSN2Q9GZP1 204 aa6.33□□□□□ -1.4
ATXN3-245ENST00000556958 NXF3Q9H4D5 531 aaKnown RBP6.33□□□□□ -1.4
ATXN3-245ENST00000556958 EBF3Q9H4W6 596 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms