RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 XKR3Q5GH77 459 aa7.64□□□□□ -1.19
ATXN3-236ENST00000556220 JAKMIP3Q5VZ66 844 aa7.64□□□□□ -1.19
ATXN3-236ENST00000556220 RNF43Q68DV7 783 aa7.64□□□□□ -1.19
ATXN3-236ENST00000556220 ANKRD34AQ69YU3 496 aa7.64□□□□□ -1.19
ATXN3-236ENST00000556220 CASC1Q6TDU7 716 aa7.64□□□□□ -1.19
ATXN3-236ENST00000556220 PRSS55Q6UWB4 352 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-236ENST00000556220 ING5Q8WYH8 240 aa7.64□□□□□ -1.19
ATXN3-236ENST00000556220 GATA6Q92908 595 aa7.64□□□□□ -1.19
ATXN3-236ENST00000556220 NLRP4Q96MN2 994 aa7.64□□□□□ -1.19
ATXN3-236ENST00000556220 BRD9Q9H8M2 597 aa7.64□□□□□ -1.19
ATXN3-236ENST00000556220 ZNF334Q9HCZ1 680 aaPredicted RBP7.64□□□□□ -1.19
ATXN3-236ENST00000556220 TRPV5Q9NQA5 729 aa7.64□□□□□ -1.19
ATXN3-236ENST00000556220 HCFC1R1Q9NWW0 138 aa7.64□□□□□ -1.19
ATXN3-236ENST00000556220 ADAM28Q9UKQ2 775 aa7.64□□□□□ -1.19
ATXN3-236ENST00000556220 MRPS23Q9Y3D9 190 aaKnown RBP7.64□□□□□ -1.19
ATXN3-236ENST00000556220 RALGAPA1Q6GYQ0 2036 aa7.64□□□□□ -1.19
ATXN3-236ENST00000556220 PATJQ8NI35 1801 aa7.64□□□□□ -1.19
ATXN3-236ENST00000556220 ASH1LQ9NR48 2969 aaKnown RBP7.63□□□□□ -1.19
ATXN3-236ENST00000556220 GCN1Q92616 2671 aaKnown RBP7.63□□□□□ -1.19
ATXN3-236ENST00000556220 MAST4O15021 2626 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 LOC400499M0QZD8 3231 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 KIAA1324LA8MWY0 1029 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-236ENST00000556220 hCG_1984214I3L0E3 225 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 SH2B2O14492 632 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-236ENST00000556220 GIPC1O14908 333 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 SART1O43290 800 aaKnown RBP7.63□□□□□ -1.19
ATXN3-236ENST00000556220 MAFO75444 373 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-236ENST00000556220 EPN2O95208 641 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 SPINK2P20155 84 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 CIITAP33076 1130 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 MLH1P40692 756 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 LIFRP42702 1097 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 RAP1GAPP47736 663 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 ARL4DP49703 201 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 SCNN1GP51170 649 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 NOVA1P51513 510 aaKnown RBP7.63□□□□□ -1.19
ATXN3-236ENST00000556220 PRR16Q569H4 304 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 RTP2Q5QGT7 225 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 AXDND1Q5T1B0 1012 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-236ENST00000556220 HEATR6Q6AI08 1181 aaKnown RBP7.63□□□□□ -1.19
ATXN3-236ENST00000556220 RTL10Q7L3V2 364 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 CACNA2D4Q7Z3S7 1137 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 SRGAP1Q7Z6B7 1085 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 WDR5BQ86VZ2 330 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 RAB11FIP4Q86YS3 637 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 ZDHHC13Q8IUH4 622 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 TRIM42Q8IWZ5 723 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 FAM20CQ8IXL6 584 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 ZNF713Q8N859 430 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-236ENST00000556220 TMEM102Q8N9M5 508 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-236ENST00000556220 LNX1Q8TBB1 728 aaPredicted RBP7.63□□□□□ -1.19
ATXN3-236ENST00000556220 SLC7A14Q8TBB6 771 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 UBASH3BQ8TF42 649 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 TMEM87BQ96K49 555 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 FAM83CQ9BQN1 747 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 SH2D3AQ9BRG2 576 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 TTPALQ9BTX7 342 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 TRMT61BQ9BVS5 477 aaKnown RBP7.63□□□□□ -1.19
ATXN3-236ENST00000556220 C7orf69Q9H7B7 122 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 MINDY3Q9H8M7 445 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 ZFP14Q9HCL3 533 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 BARHL2Q9NY43 387 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 GIT1Q9Y2X7 761 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 IPPQ9Y573 584 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 PCDHGA5Q9Y5G8 931 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 SLC12A7Q9Y666 1083 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 PIAS3Q9Y6X2 628 aa7.63□□□□□ -1.19
ATXN3-236ENST00000556220 NAV2Q8IVL1 2488 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 MYH9P35579 1960 aaKnown RBP7.62□□□□□ -1.19
ATXN3-236ENST00000556220 MYH15Q9Y2K3 1946 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 MTCL1Q9Y4B5 1905 aaKnown RBP7.62□□□□□ -1.19
ATXN3-236ENST00000556220 CACNA1EQ15878 2313 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 TMEM150BA6NC51 233 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 ADAM12O43184 909 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 PRC1O43663 620 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 TOP3BO95985 862 aaKnown RBP7.62□□□□□ -1.19
ATXN3-236ENST00000556220 TGFB1P01137 390 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 RHOP08100 348 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 FCARP24071 287 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 CCNE1P24864 410 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 MPSTP25325 297 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 SFNP31947 248 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 JAK3P52333 1124 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 MLLT6P55198 1093 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-236ENST00000556220 ZNF252P-AS1Q0IIN9 211 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 RAB33AQ14088 237 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 GRM2Q14416 872 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 SLC5A9Q2M3M2 681 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 GSTCDQ8NEC7 633 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 ZCCHC14Q8WYQ9 949 aaKnown RBP7.62□□□□□ -1.19
ATXN3-236ENST00000556220 RABGGTAQ92696 567 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 LENG9Q96B70 501 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 JPH2Q9BR39 696 aaPredicted RBP7.62□□□□□ -1.19
ATXN3-236ENST00000556220 SCNM1Q9BWG6 230 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 EIF2AQ9BY44 585 aaKnown RBP7.62□□□□□ -1.19
ATXN3-236ENST00000556220 SOX13Q9UN79 622 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 HES2Q9Y543 173 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 COL4A3BPQ9Y5P4 624 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 LAMA1P25391 3075 aa7.62□□□□□ -1.19
ATXN3-236ENST00000556220 CELSR3Q9NYQ7 3312 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms