RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 GCLCP48506 637 aaPredicted RBP15.63■□□□□ 0.09
NEK9-209ENST00000556170 BCAR1P56945 870 aa15.63■□□□□ 0.09
NEK9-209ENST00000556170 DNAJC3Q13217 504 aa15.63■□□□□ 0.09
NEK9-209ENST00000556170 EEF1DP3Q658K8 133 aa15.63■□□□□ 0.09
NEK9-209ENST00000556170 EXOC8Q8IYI6 725 aa15.63■□□□□ 0.09
NEK9-209ENST00000556170 CCHCR1Q8TD31 782 aa15.63■□□□□ 0.09
NEK9-209ENST00000556170 HPDLQ96IR7 371 aa15.63■□□□□ 0.09
NEK9-209ENST00000556170 RILPQ96NA2 401 aa15.63■□□□□ 0.09
NEK9-209ENST00000556170 DHX35Q9H5Z1 703 aaKnown RBP15.63■□□□□ 0.09
NEK9-209ENST00000556170 A8MXQ7 604 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 INSRRP14616 1297 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 PIGHQ14442 188 aaPredicted RBP15.62■□□□□ 0.09
NEK9-209ENST00000556170 PPP1R2P3Q6NXS1 205 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 LRRN4Q8WUT4 740 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 ACAP3Q96P50 834 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.62■□□□□ 0.09
NEK9-209ENST00000556170 ASNSD1Q9NWL6 643 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 TPX2Q9ULW0 747 aaKnown RBP15.62■□□□□ 0.09
NEK9-209ENST00000556170 SCN7AQ01118 1682 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 ARAP2Q8WZ64 1704 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 MYH11P35749 1972 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 DYNC1LI2O43237 492 aaPredicted RBP15.62■□□□□ 0.09
NEK9-209ENST00000556170 PPFIA2O75334 1257 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 TROVE2P10155 538 aaKnown RBP eCLIP15.62■□□□□ 0.09
NEK9-209ENST00000556170 SDC4P31431 198 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 OTUD4Q01804 1114 aaKnown RBP15.62■□□□□ 0.09
NEK9-209ENST00000556170 QPCTQ16769 361 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 C3orf62Q6ZUJ4 267 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 APBB1IPQ7Z5R6 666 aaPredicted RBP15.62■□□□□ 0.09
NEK9-209ENST00000556170 TEPSINQ96N21 525 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 SNX25Q9H3E2 840 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 ACTR5Q9H9F9 607 aaPredicted RBP15.62■□□□□ 0.09
NEK9-209ENST00000556170 GPRC5DQ9NZD1 345 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 APRTP07741 180 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 LCP1P13796 627 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 SPARCL1Q14515 664 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 TMEM132DQ14C87 1099 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 CCDC110Q8TBZ0 833 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 AFG1LQ8WV93 481 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 PIK3R5Q8WYR1 880 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 FHDC1Q9C0D6 1143 aaPredicted RBP15.62■□□□□ 0.09
NEK9-209ENST00000556170 RAB6BQ9NRW1 208 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.62■□□□□ 0.09
NEK9-209ENST00000556170 ERAP1Q9NZ08 941 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 KLK14Q9P0G3 267 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 MYH7BA7E2Y1 1941 aa15.62■□□□□ 0.09
NEK9-209ENST00000556170 STAG3L1P0CL83 205 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 RFC1P35251 1148 aaPredicted RBP15.61■□□□□ 0.09
NEK9-209ENST00000556170 CD302Q8IX05 232 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 DNERQ8NFT8 737 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 APOBEC3GQ9HC16 384 aaKnown RBP15.61■□□□□ 0.09
NEK9-209ENST00000556170 PDGFCQ9NRA1 345 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.61■□□□□ 0.09
NEK9-209ENST00000556170 ARHGAP28Q9P2N2 729 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 TMEM59LQ9UK28 342 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 ERFP50548 548 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 AP3M2P53677 418 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 SESN3P58005 492 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 C1orf220Q5T0J3 134 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 MPZL3Q6UWV2 235 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 ANKRD13AQ8IZ07 590 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 RSRC1Q96IZ7 334 aaKnown RBP15.61■□□□□ 0.09
NEK9-209ENST00000556170 SLC13A1Q9BZW2 595 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 BTBD7Q9P203 1132 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 NAALADL1Q9UQQ1 740 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 TRAPPC3O43617 180 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 HBP1O60381 514 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 OAZ1P54368 228 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 NOMO3P69849 1222 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 STAT4Q14765 748 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 BRSK2Q8IWQ3 736 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 KLC4Q9NSK0 619 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 PCYOX1Q9UHG3 505 aa15.61■□□□□ 0.09
NEK9-209ENST00000556170 KCNN4O15554 427 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 CPP00450 1065 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 CCNG2Q16589 344 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 SPOCD1Q6ZMY3 1216 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 ACOT1Q86TX2 421 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 VPS52Q8N1B4 723 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 MTMR14Q8NCE2 650 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 BANF1O75531 89 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 PECAM1P16284 738 aaPredicted RBP15.6■□□□□ 0.09
NEK9-209ENST00000556170 HNRNPH1P31943 449 aaKnown RBP15.6■□□□□ 0.09
NEK9-209ENST00000556170 CTCFP49711 727 aaPredicted RBP15.6■□□□□ 0.09
NEK9-209ENST00000556170 SNX16P57768 344 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 LGSNQ5TDP6 509 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 DENND1BQ6P3S1 775 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 EXD1Q8NHP7 514 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 MCUR1Q96AQ8 359 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 WHRNQ9P202 907 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 DDX60LQ5H9U9 1706 aaKnown RBP15.6■□□□□ 0.09
NEK9-209ENST00000556170 LTBP4Q8N2S1 1624 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 PSTPIP1O43586 416 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 CREB1P16220 341 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 WDR49Q8IV35 697 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 NLGN2Q8NFZ4 835 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 FAM129AQ9BZQ8 928 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 DDX56Q9NY93 547 aaKnown RBP15.6■□□□□ 0.09
NEK9-209ENST00000556170 TULP2O00295 520 aa15.6■□□□□ 0.09
NEK9-209ENST00000556170 MAPK13O15264 365 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms