RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 GCNT3O95395 438 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 F11P03951 625 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 CSH1P0DML2 217 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 CSH2P0DML3 217 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 GJA1P17302 382 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 CXCL12P48061 93 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 NASPP49321 788 aaPredicted RBP8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 RPL10AP62906 217 aaKnown RBP8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 RBP5P82980 135 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 ARHGAP8P85298 464 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 MYL7Q01449 175 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 TSPY1Q01534 308 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 MTAPQ13126 283 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 GRM2Q14416 872 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 TAF12Q16514 161 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 MGAT5BQ3V5L5 792 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 SLC39A12Q504Y0 691 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 WSCD1Q658N2 575 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 LRRTM3Q86VH5 581 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 CCDC65Q8IXS2 484 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 EFCAB13Q8IY85 973 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 SYCP3Q8IZU3 236 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 SPEM1Q8N4L4 309 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 TOP6BLQ8N6T0 577 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 KIAA1958Q8N8K9 716 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 LINC00301Q8NCQ3 95 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 OR10T2Q8NGX3 314 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 BPIFB1Q8TDL5 484 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 EXOC4Q96A65 974 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 FUBP3Q96I24 572 aaKnown RBP eCLIP8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 MYRFLQ96LU7 910 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 GCNAQ96QF7 691 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 USP28Q96RU2 1077 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 PYM1Q9BRP8 204 aaKnown RBP8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 TNMDQ9H2S6 317 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 SLITRK6Q9H5Y7 841 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 KIF9Q9HAQ2 790 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 IL21Q9HBE4 155 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 DLL3Q9NYJ7 618 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 UXTQ9UBK9 157 aaPredicted RBP8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 ITGA11Q9UKX5 1188 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 MTMR6Q9Y217 621 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 PCDHB5Q9Y5E4 795 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 PIAS3Q9Y6X2 628 aa8.39□□□□□ -1.07
PTCSC3-201ENST00000556013 SPTBN4Q9H254 2564 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 CCDC163A0A0D9SF12 145 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 ZNF233A6NK53 670 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 NRG2O14511 850 aaPredicted RBP8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 STX6O43752 255 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 FOXD2O60548 495 aaPredicted RBP8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 LRP3O75074 770 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 TDGF1P13385 188 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 PFKLP17858 780 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 CCNE1P24864 410 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 PCSK1P29120 753 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 STAT6P42226 847 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 KCNA1Q09470 495 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 ZNF268Q14587 947 aaPredicted RBP8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 CFAP221Q4G0U5 840 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 GPR158Q5T848 1215 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 ATL3Q6DD88 541 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 LIMS2Q7Z4I7 341 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 CMTM8Q8IZV2 173 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 GPD1LQ8N335 351 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 C1orf127Q8N9H9 656 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 CXorf38Q8TB03 319 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 ZNF507Q8TCN5 953 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 SNX21Q969T3 373 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 ZNF396Q96N95 335 aaPredicted RBP8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 CLIC6Q96NY7 704 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 TMEM209Q96SK2 561 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 FAM83CQ9BQN1 747 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 FAM213AQ9BRX8 229 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 SLC46A2Q9BY10 475 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 BACH2Q9BYV9 841 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 PANK4Q9NVE7 773 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 KBTBD4Q9NVX7 518 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 CGNQ9P2M7 1197 aaKnown RBP8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 AGAP1Q9UPQ3 857 aa8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 R3HCC1Q9Y3T6 440 aaKnown RBP8.38□□□□□ -1.07
PTCSC3-201ENST00000556013 MIA3Q5JRA6 1907 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 TISP43B9A030 160 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 SPECC1L-ADORA2AF8WAN1 911 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 K7ELQ4 463 aaPredicted RBP8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 SPTLC2O15270 562 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 EIF3DO15371 548 aaKnown RBP eCLIP8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 ATG13O75143 517 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 PRPF40AO75400 957 aaKnown RBP8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 YEATS4O95619 227 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 IDEP14735 1019 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 TCF3P15923 654 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 HMGA1P17096 107 aaKnown RBP8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 ATF6P18850 670 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 CTHP32929 405 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 AVPR1AP37288 418 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 MAGEA11P43364 429 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 KPNA1P52294 538 aaPredicted RBP8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 NLRP12P59046 1061 aa8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 TFAMQ00059 246 aaKnown RBP8.37□□□□□ -1.07
PTCSC3-201ENST00000556013 MYO1EQ12965 1108 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms