RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-210ENST00000555668 PPP1R42Q7Z4L9 355 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 NOP9Q86U38 636 aaKnown RBP4.33□□□□□ -1.72
GPHN-210ENST00000555668 CPNE8Q86YQ8 564 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 PASD1Q8IV76 773 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 CROCCP3Q8IVE0 287 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 SCUBE1Q8IWY4 988 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 CHPFQ8IZ52 775 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 AADATQ8N5Z0 425 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 FAM169BQ8N8A8 192 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 BBOF1Q8ND07 529 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 FEZF2Q8TBJ5 459 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 ZNF473Q8WTR7 871 aaKnown RBP4.33□□□□□ -1.72
GPHN-210ENST00000555668 ATL1Q8WXF7 558 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 ALG3Q92685 438 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 PEX13Q92968 403 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 TBC1D20Q96BZ9 403 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 ANAPC16Q96DE5 110 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 CEP95Q96GE4 821 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 MAELQ96JY0 434 aaKnown RBP4.33□□□□□ -1.72
GPHN-210ENST00000555668 CEP295NLQ96MC4 621 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 MOGAT1Q96PD6 335 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 GBP5Q96PP8 586 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 CENPKQ9BS16 269 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 HAUS8Q9BT25 410 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 AGXT2Q9BYV1 514 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 CCDC113Q9H0I3 377 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 TRPV6Q9H1D0 765 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 NUP62CLQ9H1M0 184 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 CD93Q9NPY3 652 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 SAMSN1Q9NSI8 373 aaKnown RBP4.33□□□□□ -1.72
GPHN-210ENST00000555668 ATP8A2Q9NTI2 1148 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 DDX19AQ9NUU7 478 aaKnown RBP4.33□□□□□ -1.72
GPHN-210ENST00000555668 HAUS2Q9NVX0 235 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.33□□□□□ -1.72
GPHN-210ENST00000555668 SEC63Q9UGP8 760 aaKnown RBP4.33□□□□□ -1.72
GPHN-210ENST00000555668 BAIAP2L1Q9UHR4 511 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 RASAL2Q9UJF2 1139 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 NUDT5Q9UKK9 219 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 KIAA1257Q9ULG3 409 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 HPCAL4Q9UM19 191 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 LIMCH1Q9UPQ0 1083 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 EXOC7Q9UPT5 735 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 TMA7Q9Y2S6 64 aaKnown RBP4.33□□□□□ -1.72
GPHN-210ENST00000555668 RWDD3Q9Y3V2 267 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 TRIM17Q9Y577 477 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 PCDHB4Q9Y5E5 795 aa4.33□□□□□ -1.72
GPHN-210ENST00000555668 CEP152O94986 1710 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 HECW2Q9P2P5 1572 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 WDR62O43379 1518 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 FANCAO15360 1455 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 BCL9O00512 1426 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 SSH2Q76I76 1423 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 USP47Q96K76 1375 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 ZNF536O15090 1300 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 PDS5AQ29RF7 1337 aaKnown RBP4.32□□□□□ -1.72
GPHN-210ENST00000555668 A0A1B0GVL5 298 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 MACROD2A1Z1Q3 448 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 CCDC169A6NNP5 214 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 TMEM114B3SHH9 223 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 ERVV-2B6SEH9 535 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 KIF28PB7ZC32 967 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 FAM47E-STBD1D6RA91 191 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 GOLGA8MH3BSY2 632 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 NOP56O00567 594 aaKnown RBP4.32□□□□□ -1.72
GPHN-210ENST00000555668 NDC80O14777 642 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 FFAR3O14843 346 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 NPHS1O60500 1241 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 CUTAO60888 179 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 PPP1R11O60927 126 aaPredicted RBP4.32□□□□□ -1.72
GPHN-210ENST00000555668 GUCY1B2O75343 617 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 SERPINB7O75635 380 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 TSPAN9O75954 239 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 FKBP9O95302 570 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 OLFM2O95897 454 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 PAHP00439 452 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 ASLP04424 464 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 SFTPCP11686 197 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 GYS1P13807 737 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 ATF2P15336 505 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 PRLRP16471 622 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 ZKSCAN1P17029 563 aaPredicted RBP4.32□□□□□ -1.72
GPHN-210ENST00000555668 CTRB1P17538 263 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 ATF7P17544 494 aaPredicted RBP4.32□□□□□ -1.72
GPHN-210ENST00000555668 M6PRP20645 277 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 SFPQP23246 707 aaKnown RBP eCLIP4.32□□□□□ -1.724e-7■□□□□ 9.9
GPHN-210ENST00000555668 ANXA13P27216 316 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 BUD31P41223 144 aaPredicted RBP4.32□□□□□ -1.72
GPHN-210ENST00000555668 TUFMP49411 452 aaKnown RBP4.32□□□□□ -1.72
GPHN-210ENST00000555668 TMED10P49755 219 aaKnown RBP4.32□□□□□ -1.72
GPHN-210ENST00000555668 ZNF143P52747 638 aaPredicted RBP4.32□□□□□ -1.72
GPHN-210ENST00000555668 ADARP55265 1226 aaKnown RBP4.32□□□□□ -1.72
GPHN-210ENST00000555668 DNAJC3Q13217 504 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 SP140Q13342 867 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 ITGB3BPQ13352 177 aaPredicted RBP4.32□□□□□ -1.72
GPHN-210ENST00000555668 PKP1Q13835 747 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 CYLC2Q14093 348 aaPredicted RBP4.32□□□□□ -1.72
GPHN-210ENST00000555668 KIF22Q14807 665 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 SLC9A5Q14940 896 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 NCAPHQ15003 741 aa4.32□□□□□ -1.72
GPHN-210ENST00000555668 GSTA3Q16772 222 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms