RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 A0A0B4J269 797 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 VSTM5A8MXK1 200 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 MYO1CO00159 1063 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 UNC5CO95185 931 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 GRPP07492 148 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 MPLP40238 635 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 NDUFV1P49821 464 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 CACNB3P54284 484 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 MC2RQ01718 297 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 TUBB3Q13509 450 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 GBX1Q14549 363 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 SF3B3Q15393 1217 aaKnown RBP5.02□□□□□ -1.61
SCFD1-214ENST00000554819 ERCC6LQ2NKX8 1250 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 LONRF3Q496Y0 759 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 SFRP4Q6FHJ7 346 aaPredicted RBP5.02□□□□□ -1.61
SCFD1-214ENST00000554819 PPP4R4Q6NUP7 873 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 VWA1Q6PCB0 445 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 LAYNQ6UX15 382 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 SLC44A3Q8N4M1 653 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 KBTBD7Q8WVZ9 684 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 SUCLG2Q96I99 432 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 PGBD1Q96JS3 809 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 NELL2Q99435 816 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 ZMAT3Q9HA38 289 aaKnown RBP5.02□□□□□ -1.61
SCFD1-214ENST00000554819 LRIT1Q9P2V4 623 aa5.02□□□□□ -1.61
SCFD1-214ENST00000554819 CFAP69A5D8W1 941 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 YY2O15391 372 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 MPPED1O15442 326 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 PROM1O43490 865 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 DNAJB5O75953 348 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 HRGP04196 525 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 ATXN1LP0C7T5 689 aaKnown RBP5.01□□□□□ -1.61
SCFD1-214ENST00000554819 XRCC6P12956 609 aaKnown RBP eCLIP5.01□□□□□ -1.61
SCFD1-214ENST00000554819 FOLR3P41439 243 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 GCLCP48506 637 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-214ENST00000554819 NXPH1P58417 271 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 SATB1Q01826 763 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 ITIH3Q06033 890 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 FOXI1Q12951 378 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 IQCB1Q15051 598 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 LLGL1Q15334 1064 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 CNN3Q15417 329 aaKnown RBP5.01□□□□□ -1.61
SCFD1-214ENST00000554819 LMBRD2Q68DH5 695 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-214ENST00000554819 ZNF783Q6ZMS7 281 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 CCDC149Q6ZUS6 474 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 CHST15Q7LFX5 561 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-214ENST00000554819 B3GALNT2Q8NCR0 500 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 OR6B3Q8NGW1 331 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 SLC30A5Q8TAD4 765 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 NT5C1BQ96P26 610 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 SPATA5L1Q9BVQ7 753 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 MRPS18AQ9NVS2 196 aaKnown RBP5.01□□□□□ -1.61
SCFD1-214ENST00000554819 OBP2AQ9NY56 170 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.01□□□□□ -1.61
SCFD1-214ENST00000554819 CHPF2Q9P2E5 772 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 HESX1Q9UBX0 185 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 TPCN1Q9ULQ1 816 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 TMX2Q9Y320 296 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 PAXBP1Q9Y5B6 917 aa5.01□□□□□ -1.61
SCFD1-214ENST00000554819 FRMPD2Q68DX3 1309 aaPredicted RBP5□□□□□ -1.61
SCFD1-214ENST00000554819 FRS3O43559 492 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 ORC4O43929 436 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 TBC1D4O60343 1298 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 PARNO95453 639 aaKnown RBP5□□□□□ -1.61
SCFD1-214ENST00000554819 ZBED1O96006 694 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 KITP10721 976 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 CYP2C9P11712 490 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 NPR1P16066 1061 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 PROZP22891 400 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 SLC7A1P30825 629 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 TOB1P50616 345 aaPredicted RBP5□□□□□ -1.61
SCFD1-214ENST00000554819 MRPS35P82673 323 aaKnown RBP5□□□□□ -1.61
SCFD1-214ENST00000554819 PTPRRQ15256 657 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 NBPF8Q3BBV2 869 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 SLC44A4Q53GD3 710 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 RNF220Q5VTB9 566 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 DARS2Q6PI48 645 aaKnown RBP5□□□□□ -1.61
SCFD1-214ENST00000554819 PCSK4Q6UW60 755 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 CELF5Q8N6W0 485 aaKnown RBP5□□□□□ -1.61
SCFD1-214ENST00000554819 TOR1AIP2Q8NFQ8 470 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 IL31RAQ8NI17 732 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 ANKS1AQ92625 1134 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 FBXL20Q96IG2 436 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 SLC46A1Q96NT5 459 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 P2RX7Q99572 595 aaKnown RBP5□□□□□ -1.61
SCFD1-214ENST00000554819 TRIM54Q9BYV2 358 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 TPSD1Q9BZJ3 242 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 SMOC2Q9H3U7 446 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 ATP6V0A4Q9HBG4 840 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 XPR1Q9UBH6 696 aa5□□□□□ -1.61
SCFD1-214ENST00000554819 CCDC151A5D8V7 595 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 ISM1B1AKI9 464 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 BTN3A1O00481 513 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 PPP3CBP16298 524 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 CHRM3P20309 590 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 CD6P30203 668 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 ADRA1BP35368 520 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 VIPR2P41587 438 aa4.99□□□□□ -1.61
SCFD1-214ENST00000554819 PXNP49023 591 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms