RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 CNGA3Q16281 694 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 BBS9Q3SYG4 887 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 FOXR1Q6PIV2 292 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 DGLUCYQ7Z3D6 616 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SPATS2Q86XZ4 545 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ESX1Q8N693 406 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ANKRD52Q8NB46 1076 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 OR6C4Q8NGE1 309 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 CCDC26Q8TAB7 109 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SCFD2Q8WU76 684 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 LENG1Q96BZ8 264 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 RUNDC3BQ96NL0 473 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 PHACTR1Q9C0D0 580 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SEMA4AQ9H3S1 761 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 RAVER2Q9HCJ3 691 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 LUC7LQ9NQ29 371 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 IL17RBQ9NRM6 502 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 COQ3Q9NZJ6 369 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 CALCOCO1Q9P1Z2 691 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ZSWIM5Q9P217 1185 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 DUSP12Q9UNI6 340 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 PLAAQ9Y263 795 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 EXOC6BQ9Y2D4 811 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 AK5Q9Y6K8 562 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 MKI67P46013 3256 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ABCB11O95342 1321 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 UMODL1Q5DID0 1318 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 GRXCR1A8MXD5 290 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 C1QTNF9BB2RNN3 333 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 KIF28PB7ZC32 967 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 AREL1O15033 823 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 GPAA1O43292 621 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 FZD6O60353 706 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 TADA3O75528 432 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 DKK1O94907 266 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 KRT1P04264 644 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 RPLP2P05387 115 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ALADP13716 330 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SELPP16109 830 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ELF1P32519 619 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 NR2C2P49116 596 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 RWDD2BP57060 319 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 WDR5P61964 334 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 CNTN2Q02246 1040 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 PPARAQ07869 468 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 NR5A1Q13285 461 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ORC1Q13415 861 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 TTLL4Q14679 1199 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 POSTNQ15063 836 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 MEA1Q16626 185 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 TIGD5Q53EQ6 642 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ABRAXAS1Q6UWZ7 409 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 CLEC10AQ8IUN9 316 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 NOSTRINQ8IVI9 506 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 FAM178BQ8IXR5 827 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SYTL1Q8IYJ3 562 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ZNF444Q8N0Y2 327 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 LINC00528Q8N1L1 170 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SPC24Q8NBT2 197 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 TET1Q8NFU7 2136 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 RIN3Q8TB24 985 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 NOC3LQ8WTT2 800 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SCG3Q8WXD2 468 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ANKRD7Q92527 254 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SEC16BQ96JE7 1060 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 TTC25Q96NG3 672 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 RAD9AQ99638 391 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 DDX23Q9BUQ8 820 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 NACAP1Q9BZK3 213 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 SAP130Q9H0E3 1048 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 CCDC113Q9H0I3 377 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 TRPV6Q9H1D0 765 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 TTC12Q9H892 705 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 CRLF2Q9HC73 371 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 PPARGC1AQ9UBK2 798 aaKnown RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 ITGB1BP2Q9UKP3 347 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 RWDD3Q9Y3V2 267 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 PCDHGC5Q9Y5F6 944 aa2.91□□□□□ -1.94
PRPF39-206ENST00000554429 FNDC1Q4ZHG4 1894 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-206ENST00000554429 BRCA2P51587 3418 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 CUL9Q8IWT3 2517 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 SMIM22K7EJ46 135 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 M0R2C6 588 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 OPLAHO14841 1288 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 POLR3GO15318 223 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-206ENST00000554429 DKC1O60832 514 aaKnown RBP eCLIP2.9□□□□□ -1.949e-9■■■■□ 19.9
PRPF39-206ENST00000554429 KCNJ13O60928 360 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 ZNF189O75820 626 aaPredicted RBP2.9□□□□□ -1.94
PRPF39-206ENST00000554429 DDHD2O94830 711 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 GJB5O95377 273 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 MT-CO1P00395 513 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 RB1P06400 928 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 ASGR2P07307 311 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 MMP3P08254 477 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 LINC00271P0C7V0 271 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 ACRP10323 421 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 STMN1P16949 149 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 EIF4BP23588 611 aaKnown RBP2.9□□□□□ -1.94
PRPF39-206ENST00000554429 HNF4AP41235 474 aa2.9□□□□□ -1.94
PRPF39-206ENST00000554429 KCNJ6P48051 423 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms