RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 ZFYVE19Q96K21 471 aa22.3■■□□□ 1.16
CACNB3-218ENST00000550771 STRA6Q9BX79 667 aa22.3■■□□□ 1.16
CACNB3-218ENST00000550771 RBM12Q9NTZ6 932 aaKnown RBP22.3■■□□□ 1.16
CACNB3-218ENST00000550771 USP18Q9UMW8 372 aa22.3■■□□□ 1.16
CACNB3-218ENST00000550771 PRAMEF12O95522 483 aa22.29■■□□□ 1.16
CACNB3-218ENST00000550771 CNR2P34972 360 aa22.29■■□□□ 1.16
CACNB3-218ENST00000550771 PNPLA4P41247 253 aa22.29■■□□□ 1.16
CACNB3-218ENST00000550771 CYP4F8P98187 520 aa22.29■■□□□ 1.16
CACNB3-218ENST00000550771 PTPAQ15257 358 aa22.29■■□□□ 1.16
CACNB3-218ENST00000550771 TAF12Q16514 161 aa22.29■■□□□ 1.16
CACNB3-218ENST00000550771 WDR44Q5JSH3 913 aa22.29■■□□□ 1.16
CACNB3-218ENST00000550771 USP49Q70CQ1 688 aa22.29■■□□□ 1.16
CACNB3-218ENST00000550771 DYMQ7RTS9 669 aa22.29■■□□□ 1.16
CACNB3-218ENST00000550771 DCP1BQ8IZD4 617 aaKnown RBP22.29■■□□□ 1.16
CACNB3-218ENST00000550771 SYNPOQ8N3V7 929 aa22.29■■□□□ 1.16
CACNB3-218ENST00000550771 ZNF560Q96MR9 790 aa22.29■■□□□ 1.16
CACNB3-218ENST00000550771 THG1LQ9NWX6 298 aaKnown RBP22.29■■□□□ 1.16
CACNB3-218ENST00000550771 CDV3Q9UKY7 258 aaKnown RBP22.29■■□□□ 1.16
CACNB3-218ENST00000550771 EXOC7Q9UPT5 735 aa22.29■■□□□ 1.16
CACNB3-218ENST00000550771 TSC2P49815 1807 aa22.29■■□□□ 1.16
CACNB3-218ENST00000550771 K7ESF4 209 aa22.28■■□□□ 1.16
CACNB3-218ENST00000550771 GAP43P17677 238 aa22.28■■□□□ 1.16
CACNB3-218ENST00000550771 ATXN1P54253 815 aaKnown RBP22.28■■□□□ 1.16
CACNB3-218ENST00000550771 CCINQ13939 588 aa22.28■■□□□ 1.16
CACNB3-218ENST00000550771 LONP2Q86WA8 852 aa22.28■■□□□ 1.16
CACNB3-218ENST00000550771 GIPC2Q8TF65 315 aa22.28■■□□□ 1.16
CACNB3-218ENST00000550771 SLC46A2Q9BY10 475 aa22.28■■□□□ 1.16
CACNB3-218ENST00000550771 IKZF4Q9H2S9 585 aa22.28■■□□□ 1.16
CACNB3-218ENST00000550771 MRPL44Q9H9J2 332 aaKnown RBP22.28■■□□□ 1.16
CACNB3-218ENST00000550771 PARD6AQ9NPB6 346 aa22.28■■□□□ 1.16
CACNB3-218ENST00000550771 ABI2Q9NYB9 513 aaPredicted RBP22.28■■□□□ 1.16
CACNB3-218ENST00000550771 FBXO2Q9UK22 296 aaPredicted RBP22.28■■□□□ 1.16
CACNB3-218ENST00000550771 SRPRBQ9Y5M8 271 aaKnown RBP22.28■■□□□ 1.16
CACNB3-218ENST00000550771 CLIC4Q9Y696 253 aa22.28■■□□□ 1.16
CACNB3-218ENST00000550771 SCN1AP35498 2009 aa22.28■■□□□ 1.16
CACNB3-218ENST00000550771 SOBPA7XYQ1 873 aa22.27■■□□□ 1.16
CACNB3-218ENST00000550771 LRP3O75074 770 aa22.27■■□□□ 1.16
CACNB3-218ENST00000550771 RETP07949 1114 aa22.27■■□□□ 1.16
CACNB3-218ENST00000550771 PDCP20941 246 aa22.27■■□□□ 1.16
CACNB3-218ENST00000550771 DDX6P26196 483 aaKnown RBP eCLIP22.27■■□□□ 1.16
CACNB3-218ENST00000550771 HOXA6P31267 233 aa22.27■■□□□ 1.16
CACNB3-218ENST00000550771 SIM2Q14190 667 aaPredicted RBP22.27■■□□□ 1.16
CACNB3-218ENST00000550771 RRAGBQ5VZM2 374 aa22.27■■□□□ 1.16
CACNB3-218ENST00000550771 Q6ZS52 159 aa22.27■■□□□ 1.16
CACNB3-218ENST00000550771 CMTM8Q8IZV2 173 aa22.27■■□□□ 1.16
CACNB3-218ENST00000550771 TTC8Q8TAM2 541 aa22.27■■□□□ 1.16
CACNB3-218ENST00000550771 ACCSQ96QU6 501 aa22.27■■□□□ 1.16
CACNB3-218ENST00000550771 PCDHB5Q9Y5E4 795 aa22.27■■□□□ 1.16
CACNB3-218ENST00000550771 FRYLO94915 3013 aa22.27■■□□□ 1.16
CACNB3-218ENST00000550771 VPS37CA5D8V6 355 aaPredicted RBP22.26■■□□□ 1.15
CACNB3-218ENST00000550771 MYMKA6NI61 221 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 CHURC1-FNTBB4DL54 471 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 HRO43593 1189 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 TXLNAP40222 546 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 FNTBP49356 437 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 TSPY1Q01534 308 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 TNK2Q07912 1038 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 KCNA1Q09470 495 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 CUL4AQ13619 759 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 PON2Q15165 354 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 LPAL2Q16609 132 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 NFE2Q16621 373 aaPredicted RBP22.26■■□□□ 1.15
CACNB3-218ENST00000550771 ITPRIPL2Q3MIP1 535 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 L1TD1Q5T7N2 865 aaKnown RBP22.26■■□□□ 1.15
CACNB3-218ENST00000550771 PRR23BQ6ZRT6 265 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 SV2BQ7L1I2 683 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 TMEM150AQ86TG1 271 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 BRSK2Q8IWQ3 736 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 DNAJC19Q96DA6 116 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 FAM213AQ9BRX8 229 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 RTKNQ9BST9 563 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 OLFML3Q9NRN5 406 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 WDR87Q6ZQQ6 2873 aa22.26■■□□□ 1.15
CACNB3-218ENST00000550771 NUP210Q8TEM1 1887 aaPredicted RBP22.26■■□□□ 1.15
CACNB3-218ENST00000550771 LDHAP00338 332 aaKnown RBP22.25■■□□□ 1.15
CACNB3-218ENST00000550771 F11P03951 625 aa22.25■■□□□ 1.15
CACNB3-218ENST00000550771 HMGA1P17096 107 aaKnown RBP22.25■■□□□ 1.15
CACNB3-218ENST00000550771 CDR1P51861 262 aa22.25■■□□□ 1.15
CACNB3-218ENST00000550771 NLRP12P59046 1061 aa22.25■■□□□ 1.15
CACNB3-218ENST00000550771 TFAMQ00059 246 aaKnown RBP22.25■■□□□ 1.15
CACNB3-218ENST00000550771 DMWDQ09019 674 aa22.25■■□□□ 1.15
CACNB3-218ENST00000550771 SPEM2Q0P670 501 aa22.25■■□□□ 1.15
CACNB3-218ENST00000550771 LEO1Q8WVC0 666 aaPredicted RBP22.25■■□□□ 1.15
CACNB3-218ENST00000550771 FAM83CQ9BQN1 747 aa22.25■■□□□ 1.15
CACNB3-218ENST00000550771 SMG9Q9H0W8 520 aaKnown RBP22.25■■□□□ 1.15
CACNB3-218ENST00000550771 PCDHB13Q9Y5F0 798 aa22.25■■□□□ 1.15
CACNB3-218ENST00000550771 ANK1P16157 1881 aa22.25■■□□□ 1.15
CACNB3-218ENST00000550771 GCNT3O95395 438 aa22.24■■□□□ 1.15
CACNB3-218ENST00000550771 GARTP22102 1010 aa22.24■■□□□ 1.15
CACNB3-218ENST00000550771 POLR2BP30876 1174 aaKnown RBP22.24■■□□□ 1.15
CACNB3-218ENST00000550771 AVPR1AP37288 418 aa22.24■■□□□ 1.15
CACNB3-218ENST00000550771 ALCAMQ13740 583 aa22.24■■□□□ 1.15
CACNB3-218ENST00000550771 PDCL2Q8N4E4 241 aa22.24■■□□□ 1.15
CACNB3-218ENST00000550771 LRRC52Q8N7C0 313 aa22.24■■□□□ 1.15
CACNB3-218ENST00000550771 SPATA18Q8TC71 538 aa22.24■■□□□ 1.15
CACNB3-218ENST00000550771 CACTINQ8WUQ7 758 aaKnown RBP22.24■■□□□ 1.15
CACNB3-218ENST00000550771 ACBD6Q9BR61 282 aa22.24■■□□□ 1.15
CACNB3-218ENST00000550771 KIF9Q9HAQ2 790 aa22.24■■□□□ 1.15
CACNB3-218ENST00000550771 ABCB6Q9NP58 842 aa22.24■■□□□ 1.15
CACNB3-218ENST00000550771 GKN1Q9NS71 199 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms