RNA–Protein interactions for RNA: ENST00000550552.5

TMEM106C-215, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best) BASIC

Gene TMEM106C, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-215ENST00000550552 ACBD6Q9BR61 282 aa6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 LRRC3Q9BY71 257 aa6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 GTPBP4Q9BZE4 634 aaKnown RBP6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 SDCBP2Q9H190 292 aa6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 DNAJC25Q9H1X3 360 aa6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 CLSTN2Q9H4D0 955 aa6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 DDX43Q9NXZ2 648 aaKnown RBP6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 MUTYHQ9UIF7 546 aa6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 GTF3C4Q9UKN8 822 aa6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 USTQ9Y2C2 406 aa6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 SCN1AP35498 2009 aa6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 CLUHO75153 1309 aa6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 ANK1P16157 1881 aa6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 PLXNA3P51805 1871 aa6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 PDCD11Q14690 1871 aaKnown RBP6.96□□□□□ -1.3
TMEM106C-215ENST00000550552 PSMA7O14818 248 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 XYLBO75191 536 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 TACC1O75410 805 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 MOSPD3O75425 235 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 HLA-DRAP01903 254 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 LRG1P02750 347 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 RHOP08100 348 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 PDGFRBP09619 1106 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 FAM163BP0C2L3 166 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 LAMP2P13473 410 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 PTPN2P17706 415 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 ATF6P18850 670 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 WARSP23381 471 aaKnown RBP6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 FSHRP23945 695 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 ATICP31939 592 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 GNL1P36915 607 aaPredicted RBP6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 LHX1P48742 406 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 STX17P56962 302 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 LRRC63Q05C16 580 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 TWF1Q12792 350 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 NCOA4Q13772 614 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 SLC5A9Q2M3M2 681 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 SGSM1Q2NKQ1 1148 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 PABPC1LQ4VXU2 614 aaKnown RBP6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 PRSS36Q5K4E3 855 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 SPOPLQ6IQ16 392 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 FAM171BQ6P995 826 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 OTOP3Q7RTS5 596 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 FILIP1Q7Z7B0 1213 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 ADGRF2Q8IZF7 708 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 HS6ST3Q8IZP7 471 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 TMEM86AQ8N2M4 240 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 GPR152Q8TDT2 470 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 TAS1R2Q8TE23 839 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 NELFBQ8WX92 580 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 RSAD2Q8WXG1 361 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 SEMA4DQ92854 862 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 FGF13Q92913 245 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 TCEAL4Q96EI5 215 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 TSG101Q99816 390 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 CORO1BQ9BR76 489 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 PI4K2AQ9BTU6 479 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 MKNK1Q9BUB5 465 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 SMOC2Q9H3U7 446 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 DPEP3Q9H4B8 488 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 VRTNQ9H8Y1 702 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 APOBEC3GQ9HC16 384 aaKnown RBP6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 C11orf16Q9NQ32 467 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 CRTAC1Q9NQ79 661 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 AVENQ9NQS1 362 aaPredicted RBP6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.95□□□□□ -1.32e-8■■■■■ 67.3
TMEM106C-215ENST00000550552 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 HSFX1Q9UBD0 423 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 NXF1Q9UBU9 619 aaKnown RBP6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 R3HCC1Q9Y3T6 440 aaKnown RBP6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 NR2E1Q9Y466 385 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 YIPF1Q9Y548 306 aa6.95□□□□□ -1.3
TMEM106C-215ENST00000550552 SLC16A3O15427 465 aaKnown RBP6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 DCXO43602 365 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 ASS1P00966 412 aaKnown RBP6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 HAPLN1P10915 354 aaPredicted RBP6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 EPB41P11171 864 aaKnown RBP6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 KRT13P13646 458 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 CYP2F1P24903 491 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 PCSK1P29120 753 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 GBP2P32456 591 aaPredicted RBP6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 GTF2H1P32780 548 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 ASPAP45381 313 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 RAP1GAPP47736 663 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 ALDH1A3P47895 512 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 GPR15P49685 360 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 EPHA5P54756 1037 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 PSMC1P62191 440 aaKnown RBP6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 MYL7Q01449 175 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 TSPY1Q01534 308 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 ENPEPQ07075 957 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 STIM1Q13586 685 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 ZNF699Q32M78 642 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 CBWD6Q4V339 395 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 INTS6LQ5JSJ4 861 aaKnown RBP6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 CBWD3Q5JTY5 395 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 CBWD5Q5RIA9 395 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 SDHAF4Q5VUM1 108 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 FOXR2Q6PJQ5 311 aa6.94□□□□□ -1.3
TMEM106C-215ENST00000550552 DNAJB7Q7Z6W7 309 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms