RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 SERTAD4Q9NUC0 356 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 GNL3LQ9NVN8 582 aaKnown RBP5.29□□□□□ -1.56
CNOT2-216ENST00000548939 RLIMQ9NVW2 624 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 SIDT1Q9NXL6 827 aaKnown RBP5.29□□□□□ -1.56
CNOT2-216ENST00000548939 CFAP97Q9P2B7 532 aa5.29□□□□□ -1.56
CNOT2-216ENST00000548939 CFAP20Q9Y6A4 193 aaKnown RBP5.29□□□□□ -1.56
CNOT2-216ENST00000548939 EIF4G3O43432 1585 aaKnown RBP5.29□□□□□ -1.56
CNOT2-216ENST00000548939 IKBKBO14920 756 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 PCDHGA12O60330 932 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 NXPH3O95157 252 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 CHEK2O96017 543 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 ITGALP20701 1170 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 SMARCA1P28370 1054 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 ZNF135P52742 658 aaPredicted RBP5.28□□□□□ -1.56
CNOT2-216ENST00000548939 SNAPC2Q13487 334 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 HABP2Q14520 560 aaPredicted RBP5.28□□□□□ -1.56
CNOT2-216ENST00000548939 SLC44A4Q53GD3 710 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 CEP85Q6P2H3 762 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 SLC4A10Q6U841 1118 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 NECAB2Q7Z6G3 386 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 DDX42Q86XP3 938 aaKnown RBP eCLIP5.28□□□□□ -1.56
CNOT2-216ENST00000548939 RPL36ALQ969Q0 106 aaKnown RBP5.28□□□□□ -1.56
CNOT2-216ENST00000548939 FAM136AQ96C01 138 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 CNPPD1Q9BV87 410 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 ARHGEF3Q9NR81 526 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 SH3BP4Q9P0V3 963 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 USP35Q9P2H5 1018 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 PCDHGA9Q9Y5G4 932 aaKnown RBP5.28□□□□□ -1.56
CNOT2-216ENST00000548939 PCDHGA8Q9Y5G5 932 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 PCDHGA7Q9Y5G6 932 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 PCDHGA6Q9Y5G7 932 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 PCDHGA3Q9Y5H0 932 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 MRFAP1Q9Y605 127 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 ERCC6L2Q5T890 1561 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 PEG3Q9GZU2 1588 aa5.28□□□□□ -1.56
CNOT2-216ENST00000548939 AQRO60306 1485 aaKnown RBP eCLIP5.27□□□□□ -1.57
CNOT2-216ENST00000548939 NT5C1B-RDH14C9J2C7 533 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 VPS4BO75351 444 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 JTBO76095 146 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 LATS1O95835 1130 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 BMP15O95972 392 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 FAM163BP0C2L3 166 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 MYBL2P10244 700 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 CHRM3P20309 590 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 CERS1P27544 350 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 EPHB2P29323 1055 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 CD6P30203 668 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 TUBA4AP68366 448 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 KLF9Q13886 244 aaPredicted RBP5.27□□□□□ -1.57
CNOT2-216ENST00000548939 ZNF66Q6ZN08 573 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 NEK8Q86SG6 692 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 ATRIPQ8WXE1 791 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 TEKT5Q96M29 485 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 FCRL4Q96PJ5 515 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 SIK2Q9H0K1 926 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 BHMT2Q9H2M3 363 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 TMX1Q9H3N1 280 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 SLAMF7Q9NQ25 335 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 MRPS18AQ9NVS2 196 aaKnown RBP5.27□□□□□ -1.57
CNOT2-216ENST00000548939 DISP3Q9P2K9 1392 aa5.27□□□□□ -1.57
CNOT2-216ENST00000548939 HECW2Q9P2P5 1572 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 JUPP14923 745 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 PCSK6P29122 969 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 MPGP29372 298 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 ETFDHQ16134 617 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 ABCB5Q2M3G0 1257 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 PROSER3Q2NL68 480 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 UAP1L1Q3KQV9 507 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 TEDDM1Q5T9Z0 273 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 MORN5Q5VZ52 161 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 YTHDF3Q7Z739 585 aaKnown RBP5.26□□□□□ -1.57
CNOT2-216ENST00000548939 KLHDC4Q8TBB5 520 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 ZBTB9Q96C00 473 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 GPR35Q9HC97 309 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 BTBD3Q9Y2F9 522 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 RAD54BQ9Y620 910 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 GAPVD1Q14C86 1478 aa5.26□□□□□ -1.57
CNOT2-216ENST00000548939 KIF20AO95235 890 aa5.25□□□□□ -1.57
CNOT2-216ENST00000548939 IGKV2-30P06310 120 aa5.25□□□□□ -1.57
CNOT2-216ENST00000548939 ALDH9A1P49189 494 aa5.25□□□□□ -1.57
CNOT2-216ENST00000548939 VPS53Q5VIR6 699 aa5.25□□□□□ -1.57
CNOT2-216ENST00000548939 SYDE2Q5VT97 1194 aa5.25□□□□□ -1.57
CNOT2-216ENST00000548939 SLC9A4Q6AI14 798 aa5.25□□□□□ -1.57
CNOT2-216ENST00000548939 SLC29A4Q7RTT9 530 aa5.25□□□□□ -1.57
CNOT2-216ENST00000548939 FANCBQ8NB91 859 aa5.25□□□□□ -1.57
CNOT2-216ENST00000548939 TBC1D5Q92609 795 aa5.25□□□□□ -1.57
CNOT2-216ENST00000548939 SERPINB13Q9UIV8 391 aa5.25□□□□□ -1.57
CNOT2-216ENST00000548939 MROH2BQ7Z745 1585 aa5.25□□□□□ -1.57
CNOT2-216ENST00000548939 ZNF521Q96K83 1311 aa5.24□□□□□ -1.57
CNOT2-216ENST00000548939 PRSS29PA6NIE9 313 aa5.24□□□□□ -1.57
CNOT2-216ENST00000548939 SMIM22K7EJ46 135 aa5.24□□□□□ -1.57
CNOT2-216ENST00000548939 PPM1DO15297 605 aa5.24□□□□□ -1.57
CNOT2-216ENST00000548939 PDHA1P08559 390 aa5.24□□□□□ -1.57
CNOT2-216ENST00000548939 CYP2D6P10635 497 aa5.24□□□□□ -1.57
CNOT2-216ENST00000548939 RARBP10826 455 aa5.24□□□□□ -1.57
CNOT2-216ENST00000548939 PHKA1P46020 1223 aa5.24□□□□□ -1.57
CNOT2-216ENST00000548939 PIK3CGP48736 1102 aa5.24□□□□□ -1.57
CNOT2-216ENST00000548939 DSC2Q02487 901 aa5.24□□□□□ -1.57
CNOT2-216ENST00000548939 PCBP2Q15366 365 aaKnown RBP eCLIP5.24□□□□□ -1.57
CNOT2-216ENST00000548939 AARS2Q5JTZ9 985 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms