RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 GSTA3Q16772 222 aa24.33■■□□□ 1.49
NPAS3-206ENST00000548645 PDCD7Q8N8D1 485 aaKnown RBP24.33■■□□□ 1.49
NPAS3-206ENST00000548645 GPRC5CQ9NQ84 441 aa24.33■■□□□ 1.49
NPAS3-206ENST00000548645 KLHL11Q9NVR0 708 aa24.33■■□□□ 1.49
NPAS3-206ENST00000548645 TGDSO95455 350 aa24.33■■□□□ 1.48
NPAS3-206ENST00000548645 CYP24A1Q07973 514 aa24.33■■□□□ 1.48
NPAS3-206ENST00000548645 KLHL38Q2WGJ6 581 aa24.33■■□□□ 1.48
NPAS3-206ENST00000548645 TRIM72Q6ZMU5 477 aa24.33■■□□□ 1.48
NPAS3-206ENST00000548645 RINLQ6ZS11 566 aa24.33■■□□□ 1.48
NPAS3-206ENST00000548645 BANPQ8N9N5 519 aa24.33■■□□□ 1.48
NPAS3-206ENST00000548645 ATP11CQ8NB49 1132 aa24.33■■□□□ 1.48
NPAS3-206ENST00000548645 PHC3Q8NDX5 983 aa24.33■■□□□ 1.48
NPAS3-206ENST00000548645 WDR60Q8WVS4 1066 aa24.33■■□□□ 1.48
NPAS3-206ENST00000548645 SLITRK1Q96PX8 696 aa24.33■■□□□ 1.48
NPAS3-206ENST00000548645 TMEM120AQ9BXJ8 343 aa24.33■■□□□ 1.48
NPAS3-206ENST00000548645 PLEKHA7Q6IQ23 1121 aa24.32■■□□□ 1.48
NPAS3-206ENST00000548645 NLRX1Q86UT6 975 aa24.32■■□□□ 1.48
NPAS3-206ENST00000548645 MAP4K3Q8IVH8 894 aa24.32■■□□□ 1.48
NPAS3-206ENST00000548645 PYROXD1Q8WU10 500 aa24.32■■□□□ 1.48
NPAS3-206ENST00000548645 VCPP55072 806 aaKnown RBP24.32■■□□□ 1.48
NPAS3-206ENST00000548645 FAM196AQ6ZSG2 479 aa24.32■■□□□ 1.48
NPAS3-206ENST00000548645 LRRC6Q86X45 466 aa24.32■■□□□ 1.48
NPAS3-206ENST00000548645 BICD1Q96G01 975 aa24.32■■□□□ 1.48
NPAS3-206ENST00000548645 FBXL18Q96ME1 805 aa24.32■■□□□ 1.48
NPAS3-206ENST00000548645 GBP5Q96PP8 586 aa24.32■■□□□ 1.48
NPAS3-206ENST00000548645 PAFAH2Q99487 392 aa24.32■■□□□ 1.48
NPAS3-206ENST00000548645 PCDH9Q9HC56 1237 aa24.32■■□□□ 1.48
NPAS3-206ENST00000548645 LTBP1Q14766 1721 aa24.32■■□□□ 1.48
NPAS3-206ENST00000548645 G3V3G9 751 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 YWHABP31946 246 aaKnown RBP24.31■■□□□ 1.48
NPAS3-206ENST00000548645 DSG3P32926 999 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 MCL1Q07820 350 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 TFDP1Q14186 410 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 DCAF8Q5TAQ9 597 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 FOXB2Q5VYV0 432 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 PCGF5Q86SE9 256 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 SH2D3AQ9BRG2 576 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 FBXO6Q9NRD1 293 aaPredicted RBP24.31■■□□□ 1.48
NPAS3-206ENST00000548645 SLC17A7Q9P2U7 560 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 IP6K2Q9UHH9 426 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 ANGPTL2Q9UKU9 493 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 ZBTB21Q9ULJ3 1066 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 SYNPO2Q9UMS6 1093 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 CLUHO75153 1309 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 LYPLA2O95372 231 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 KRT1P04264 644 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 FAM102BQ5T8I3 360 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 MFSD7Q6UXD7 560 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 NR1H4Q96RI1 486 aaPredicted RBP24.31■■□□□ 1.48
NPAS3-206ENST00000548645 DHRS4Q9BTZ2 278 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 KCNH7Q9NS40 1196 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 ITGB5P18084 799 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 GLRA2P23416 452 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 THOC5Q13769 683 aaKnown RBP24.31■■□□□ 1.48
NPAS3-206ENST00000548645 ATP13A4Q4VNC1 1196 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 SESTD1Q86VW0 696 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 TMEM161BQ8NDZ6 487 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 FEZF2Q8TBJ5 459 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 LBHD1Q9BQE6 289 aaPredicted RBP24.31■■□□□ 1.48
NPAS3-206ENST00000548645 SENP7Q9BQF6 1050 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 PHACTR1Q9C0D0 580 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 RANBP17Q9H2T7 1088 aaKnown RBP24.31■■□□□ 1.48
NPAS3-206ENST00000548645 ACSS3Q9H6R3 686 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 KCNK13Q9HB14 408 aa24.31■■□□□ 1.48
NPAS3-206ENST00000548645 RARBP10826 455 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 PGM1P36871 562 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 JAG1P78504 1218 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 EFTUD2Q15029 972 aaKnown RBP eCLIP24.3■■□□□ 1.48
NPAS3-206ENST00000548645 OASLQ15646 514 aaKnown RBP24.3■■□□□ 1.48
NPAS3-206ENST00000548645 NBPF20Q3BBV1 942 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.3■■□□□ 1.48
NPAS3-206ENST00000548645 MZB1Q8WU39 189 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 POMGNT1Q8WZA1 660 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 PTPRN2Q92932 1015 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 GOLGA8SH3BPF8 625 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 GOLGA8MH3BSY2 632 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 SGK1O00141 431 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 BANF1O75531 89 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 IFNB1P01574 187 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 ITGAVP06756 1048 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 SSTR1P30872 391 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 RBM5P52756 815 aaKnown RBP eCLIP24.3■■□□□ 1.48
NPAS3-206ENST00000548645 ARL4CP56559 192 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 NOMO3P69849 1222 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 PLCB3Q01970 1234 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 DYNC1I2Q13409 638 aaKnown RBP24.3■■□□□ 1.48
NPAS3-206ENST00000548645 SLC5A9Q2M3M2 681 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 WDR44Q5JSH3 913 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 NKD2Q969F2 451 aaPredicted RBP24.3■■□□□ 1.48
NPAS3-206ENST00000548645 KRT82Q9NSB4 513 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 PARVAQ9NVD7 372 aa24.3■■□□□ 1.48
NPAS3-206ENST00000548645 GOLGA8RI6L899 631 aa24.29■■□□□ 1.48
NPAS3-206ENST00000548645 C3orf62Q6ZUJ4 267 aa24.29■■□□□ 1.48
NPAS3-206ENST00000548645 CHSY1Q86X52 802 aa24.29■■□□□ 1.48
NPAS3-206ENST00000548645 PHF13Q86YI8 300 aaPredicted RBP24.29■■□□□ 1.48
NPAS3-206ENST00000548645 PASD1Q8IV76 773 aa24.29■■□□□ 1.48
NPAS3-206ENST00000548645 ALG13Q9NP73 1137 aaKnown RBP24.29■■□□□ 1.48
NPAS3-206ENST00000548645 PCDHAC2Q9Y5I4 1007 aa24.29■■□□□ 1.48
NPAS3-206ENST00000548645 RAP1GDS1P52306 607 aa24.29■■□□□ 1.48
NPAS3-206ENST00000548645 CUL3Q13618 768 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms