RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 TOM1L1O75674 476 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 LINGO3P0C6S8 592 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 TFAMQ00059 246 aaKnown RBP15.43■□□□□ 0.06
HOXC11-202ENST00000546378 SATB1Q01826 763 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 MTFR1Q15390 333 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 WDR78Q5VTH9 848 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 FBXO27Q8NI29 283 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 RNF217Q8TC41 542 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 WDR60Q8WVS4 1066 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 PTPRN2Q92932 1015 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 TAAR1Q96RJ0 339 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 NUMBLQ9Y6R0 609 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 LTBP1Q14766 1721 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 B2RBV5 119 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 MT-ND3P03897 115 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 ARFIP2P53365 341 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 ANO7Q6IWH7 933 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 ARID3BQ8IVW6 561 aaPredicted RBP15.43■□□□□ 0.06
HOXC11-202ENST00000546378 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.43■□□□□ 0.06
HOXC11-202ENST00000546378 MAGEB18Q96M61 343 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 GBP5Q96PP8 586 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 NAP1L4Q99733 375 aaKnown RBP15.43■□□□□ 0.06
HOXC11-202ENST00000546378 EBF2Q9HAK2 575 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 RNPEPL1Q9HAU8 725 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 COL20A1Q9P218 1284 aa15.43■□□□□ 0.06
HOXC11-202ENST00000546378 PPP1R12AO14974 1030 aaPredicted RBP15.42■□□□□ 0.06
HOXC11-202ENST00000546378 PDE5AO76074 875 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 MYL2P10916 166 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 ADSSP30520 456 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 ABCG1P45844 678 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 RARRES1P49788 294 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 GDF10P55107 478 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 WNT7BP56706 349 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 TMPRSS15P98073 1019 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 SEMA3FQ13275 785 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 PLEKHG4Q58EX7 1191 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 SLC30A9Q6PML9 568 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 NPNTQ6UXI9 565 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 RFX6Q8HWS3 928 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 RNF148Q8N7C7 305 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 PPFIBP2Q8ND30 876 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 ZNF75CPQ92670 426 aaPredicted RBP15.42■□□□□ 0.06
HOXC11-202ENST00000546378 BORCS6Q96GS4 357 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 CEP41Q9BYV8 373 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 PAPOLBQ9NRJ5 636 aaKnown RBP15.42■□□□□ 0.06
HOXC11-202ENST00000546378 NMRK1Q9NWW6 199 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 DDX60LQ5H9U9 1706 aaKnown RBP15.42■□□□□ 0.06
HOXC11-202ENST00000546378 TCRBV7S3A2A0A539 114 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 CES2O00748 559 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 PSMD10O75832 226 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 SRGAP2CP0DJJ0 459 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 NPTX2P47972 431 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 TAF5Q15542 800 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 HYIQ5T013 277 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 LIN9Q5TKA1 542 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 ACAD10Q6JQN1 1059 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 FAM83AQ86UY5 434 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 THNSL1Q8IYQ7 743 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 FBXO36Q8NEA4 188 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 LMO3Q8TAP4 145 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 PPP1R13LQ8WUF5 828 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 CFAP57Q96MR6 1250 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 PGLYRP2Q96PD5 576 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 UNKQ9C0B0 810 aaKnown RBP15.42■□□□□ 0.06
HOXC11-202ENST00000546378 PICK1Q9NRD5 415 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 GPATCH2LQ9NWQ4 482 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 NOCTQ9UK39 431 aaKnown RBP15.42■□□□□ 0.06
HOXC11-202ENST00000546378 MAST2Q6P0Q8 1798 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 IGLV3-22A0A075B6J6 115 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 BTNL10A8MVZ5 291 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 LPXNO60711 386 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 PEX11AO75192 247 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 CD48P09326 243 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 POTEJP0CG39 1038 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 PYGBP11216 843 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 CALB2P22676 271 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 AMPD1P23109 780 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 RAP1GAPP47736 663 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 NEK3P51956 506 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 KLC1Q07866 573 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 POLNQ7Z5Q5 900 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 BSNDQ8WZ55 320 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 ZNF408Q9H9D4 720 aa15.42■□□□□ 0.06
HOXC11-202ENST00000546378 ATXN2Q99700 1313 aaKnown RBP15.42■□□□□ 0.06
HOXC11-202ENST00000546378 FZD9O00144 591 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 CST8O60676 142 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 SERPINB6P35237 376 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 SOX11P35716 441 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 PGM1P36871 562 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 NFX1Q12986 1120 aaKnown RBP15.41■□□□□ 0.06
HOXC11-202ENST00000546378 SIX1Q15475 284 aaPredicted RBP15.41■□□□□ 0.06
HOXC11-202ENST00000546378 MCOLN2Q8IZK6 566 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 GBP7Q8N8V2 638 aaPredicted RBP15.41■□□□□ 0.06
HOXC11-202ENST00000546378 STK32AQ8WU08 396 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 PYDC1Q8WXC3 89 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 P3H4Q92791 437 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 MMP19Q99542 508 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 ARHGEF3Q9NR81 526 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 TMX2Q9Y320 296 aa15.41■□□□□ 0.06
HOXC11-202ENST00000546378 H7C0C1 242 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms