RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 HPS4Q9NQG7 708 aa18.06■□□□□ 0.48
CPSF7-225ENST00000545934 CHD8Q9HCK8 2581 aa18.06■□□□□ 0.48
CPSF7-225ENST00000545934 LAMA1P25391 3075 aa18.05■□□□□ 0.48
CPSF7-225ENST00000545934 SLC26A4O43511 780 aa18.05■□□□□ 0.48
CPSF7-225ENST00000545934 NFICP08651 508 aa18.05■□□□□ 0.48
CPSF7-225ENST00000545934 ZNF806P0C7X5 589 aa18.05■□□□□ 0.48
CPSF7-225ENST00000545934 SLC39A12Q504Y0 691 aa18.05■□□□□ 0.48
CPSF7-225ENST00000545934 ARL6IP4Q66PJ3 421 aaKnown RBP18.05■□□□□ 0.48
CPSF7-225ENST00000545934 FSTL4Q6MZW2 842 aa18.05■□□□□ 0.48
CPSF7-225ENST00000545934 C2orf15Q8WU43 125 aaKnown RBP18.05■□□□□ 0.48
CPSF7-225ENST00000545934 SEPT5Q99719 369 aaPredicted RBP18.05■□□□□ 0.48
CPSF7-225ENST00000545934 CCSER1Q9C0I3 900 aa18.05■□□□□ 0.48
CPSF7-225ENST00000545934 SMG9Q9H0W8 520 aaKnown RBP18.05■□□□□ 0.48
CPSF7-225ENST00000545934 THG1LQ9NWX6 298 aaKnown RBP18.05■□□□□ 0.48
CPSF7-225ENST00000545934 ZMYM5Q9UJ78 669 aa18.05■□□□□ 0.48
CPSF7-225ENST00000545934 VWA3AA6NCI4 1184 aa18.04■□□□□ 0.48
CPSF7-225ENST00000545934 OTOL1A6NHN0 477 aaPredicted RBP18.04■□□□□ 0.48
CPSF7-225ENST00000545934 TRDMT1O14717 391 aaKnown RBP18.04■□□□□ 0.48
CPSF7-225ENST00000545934 AKAP3O75969 853 aa18.04■□□□□ 0.48
CPSF7-225ENST00000545934 HAPLN1P10915 354 aaPredicted RBP18.04■□□□□ 0.48
CPSF7-225ENST00000545934 PMLP29590 882 aa18.04■□□□□ 0.48
CPSF7-225ENST00000545934 SMARCB1Q12824 385 aa18.04■□□□□ 0.48
CPSF7-225ENST00000545934 SF3A2Q15428 464 aaKnown RBP18.04■□□□□ 0.48
CPSF7-225ENST00000545934 PLA2G2CQ5R387 149 aa18.04■□□□□ 0.48
CPSF7-225ENST00000545934 LRRTM3Q86VH5 581 aa18.04■□□□□ 0.48
CPSF7-225ENST00000545934 CMTM8Q8IZV2 173 aa18.04■□□□□ 0.48
CPSF7-225ENST00000545934 SPPL2BQ8TCT7 592 aa18.04■□□□□ 0.48
CPSF7-225ENST00000545934 MSTO1Q9BUK6 570 aa18.04■□□□□ 0.48
CPSF7-225ENST00000545934 ARRDC1-AS1Q9H2J1 176 aa18.04■□□□□ 0.48
CPSF7-225ENST00000545934 ASB7Q9H672 318 aa18.04■□□□□ 0.48
CPSF7-225ENST00000545934 GKN1Q9NS71 199 aa18.04■□□□□ 0.48
CPSF7-225ENST00000545934 DSEQ9UL01 958 aa18.04■□□□□ 0.48
CPSF7-225ENST00000545934 SDK1Q7Z5N4 2213 aa18.04■□□□□ 0.48
CPSF7-225ENST00000545934 TNRC6BQ9UPQ9 1833 aaKnown RBP18.04■□□□□ 0.48
CPSF7-225ENST00000545934 SOBPA7XYQ1 873 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 AXIN1O15169 862 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 RPP40O75818 363 aaKnown RBP18.03■□□□□ 0.48
CPSF7-225ENST00000545934 F11P03951 625 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 HMGA1P17096 107 aaKnown RBP18.03■□□□□ 0.48
CPSF7-225ENST00000545934 GTF2BQ00403 316 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 RUNX3Q13761 415 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 TMEM132DQ14C87 1099 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 VEPH1Q14D04 833 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 PTPAQ15257 358 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 MGAT5BQ3V5L5 792 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 CACNA2D4Q7Z3S7 1137 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 KBTBD6Q86V97 674 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 RIN3Q8TB24 985 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 USP13Q92995 863 aaPredicted RBP18.03■□□□□ 0.48
CPSF7-225ENST00000545934 CDK5RAP3Q96JB5 506 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 ZC3H10Q96K80 434 aaKnown RBP18.03■□□□□ 0.48
CPSF7-225ENST00000545934 PARVGQ9HBI0 331 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 RXFP3Q9NSD7 469 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 BLOC1S4Q9NUP1 217 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 CCL26Q9Y258 94 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 C2CD2Q9Y426 696 aa18.03■□□□□ 0.48
CPSF7-225ENST00000545934 CNOT1A5YKK6 2376 aaKnown RBP18.03■□□□□ 0.48
CPSF7-225ENST00000545934 CFAP47Q6ZTR5 3102 aa18.02■□□□□ 0.48
CPSF7-225ENST00000545934 K7ENM7 598 aa18.02■□□□□ 0.48
CPSF7-225ENST00000545934 CYB561D2O14569 222 aa18.02■□□□□ 0.48
CPSF7-225ENST00000545934 TRAK2O60296 914 aa18.02■□□□□ 0.48
CPSF7-225ENST00000545934 DDX6P26196 483 aaKnown RBP eCLIP18.02■□□□□ 0.48
CPSF7-225ENST00000545934 PXNP49023 591 aaPredicted RBP18.02■□□□□ 0.48
CPSF7-225ENST00000545934 NLRP12P59046 1061 aa18.02■□□□□ 0.48
CPSF7-225ENST00000545934 GPBP1Q86WP2 473 aa18.02■□□□□ 0.48
CPSF7-225ENST00000545934 MYCT1Q8N699 235 aa18.02■□□□□ 0.48
CPSF7-225ENST00000545934 GIPC2Q8TF65 315 aa18.02■□□□□ 0.48
CPSF7-225ENST00000545934 FAM212AQ96EL1 285 aa18.02■□□□□ 0.48
CPSF7-225ENST00000545934 AK8Q96MA6 479 aa18.02■□□□□ 0.48
CPSF7-225ENST00000545934 GCNAQ96QF7 691 aa18.02■□□□□ 0.48
CPSF7-225ENST00000545934 PCDHGA5Q9Y5G8 931 aa18.02■□□□□ 0.48
CPSF7-225ENST00000545934 STYXL1Q9Y6J8 313 aa18.02■□□□□ 0.48
CPSF7-225ENST00000545934 THADAQ6YHU6 1953 aa18.02■□□□□ 0.47
CPSF7-225ENST00000545934 ANKRD63C9JTQ0 380 aa18.01■□□□□ 0.47
CPSF7-225ENST00000545934 ATG13O75143 517 aa18.01■□□□□ 0.47
CPSF7-225ENST00000545934 ACOT2P49753 483 aa18.01■□□□□ 0.47
CPSF7-225ENST00000545934 TAF6P49848 677 aa18.01■□□□□ 0.47
CPSF7-225ENST00000545934 CDR1P51861 262 aa18.01■□□□□ 0.47
CPSF7-225ENST00000545934 SHC2P98077 582 aa18.01■□□□□ 0.47
CPSF7-225ENST00000545934 POU5F1Q01860 360 aaKnown RBP18.01■□□□□ 0.47
CPSF7-225ENST00000545934 AASDHQ4L235 1098 aaPredicted RBP18.01■□□□□ 0.47
CPSF7-225ENST00000545934 N4BP2L1Q5TBK1 243 aaPredicted RBP18.01■□□□□ 0.47
CPSF7-225ENST00000545934 TRIM68Q6AZZ1 485 aa18.01■□□□□ 0.47
CPSF7-225ENST00000545934 IL31Q6EBC2 164 aa18.01■□□□□ 0.47
CPSF7-225ENST00000545934 THEM5Q8N1Q8 247 aa18.01■□□□□ 0.47
CPSF7-225ENST00000545934 CAMKK1Q8N5S9 505 aa18.01■□□□□ 0.47
CPSF7-225ENST00000545934 PYM1Q9BRP8 204 aaKnown RBP18.01■□□□□ 0.47
CPSF7-225ENST00000545934 ST6GALNAC4Q9H4F1 302 aa18.01■□□□□ 0.47
CPSF7-225ENST00000545934 EBF3Q9H4W6 596 aa18.01■□□□□ 0.47
CPSF7-225ENST00000545934 KIF9Q9HAQ2 790 aa18.01■□□□□ 0.47
CPSF7-225ENST00000545934 FBRSL1Q9HCM7 1045 aaKnown RBP18.01■□□□□ 0.47
CPSF7-225ENST00000545934 ANGPTL2Q9UKU9 493 aa18.01■□□□□ 0.47
CPSF7-225ENST00000545934 PLXND1Q9Y4D7 1925 aa18■□□□□ 0.47
CPSF7-225ENST00000545934 TISP43B9A030 160 aa18■□□□□ 0.47
CPSF7-225ENST00000545934 EGFP01133 1207 aa18■□□□□ 0.47
CPSF7-225ENST00000545934 ABCD1P33897 745 aa18■□□□□ 0.47
CPSF7-225ENST00000545934 GRSF1Q12849 480 aaKnown RBP eCLIP18■□□□□ 0.47
CPSF7-225ENST00000545934 ZNF268Q14587 947 aaPredicted RBP18■□□□□ 0.47
CPSF7-225ENST00000545934 CCDC6Q16204 474 aa18■□□□□ 0.47
CPSF7-225ENST00000545934 STPG1Q5TH74 334 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms