RNA–Protein interactions for RNA: ENST00000544866.5

PDCD2-213, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-213ENST00000544866 SEMA4DQ92854 862 aa18.03■□□□□ 0.48
PDCD2-213ENST00000544866 PGLYRP2Q96PD5 576 aa18.03■□□□□ 0.48
PDCD2-213ENST00000544866 ACBD6Q9BR61 282 aa18.03■□□□□ 0.48
PDCD2-213ENST00000544866 SMYD3Q9H7B4 428 aa18.03■□□□□ 0.48
PDCD2-213ENST00000544866 APOBEC3GQ9HC16 384 aaKnown RBP18.03■□□□□ 0.48
PDCD2-213ENST00000544866 NXF1Q9UBU9 619 aaKnown RBP18.03■□□□□ 0.48
PDCD2-213ENST00000544866 FGFR1OPO95684 399 aaKnown RBP18.02■□□□□ 0.48
PDCD2-213ENST00000544866 POU2F2P09086 479 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 FAM163BP0C2L3 166 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 ACAT1P24752 427 aaKnown RBP18.02■□□□□ 0.48
PDCD2-213ENST00000544866 LMO2P25791 158 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 TSPY1Q01534 308 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 SLC39A12Q504Y0 691 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 CT47A1Q5JQC4 288 aaPredicted RBP18.02■□□□□ 0.48
PDCD2-213ENST00000544866 INTS6LQ5JSJ4 861 aaKnown RBP18.02■□□□□ 0.48
PDCD2-213ENST00000544866 PPM1LQ5SGD2 360 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 CYP26C1Q6V0L0 522 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 FBXL13Q8NEE6 735 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 ADAMTS19Q8TE59 1207 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 SMG7Q92540 1137 aaKnown RBP18.02■□□□□ 0.48
PDCD2-213ENST00000544866 RIPOR3Q96MK2 946 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 NECTIN4Q96NY8 510 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 PKMYT1Q99640 499 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 PI4K2AQ9BTU6 479 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 SDCBP2Q9H190 292 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 POMKQ9H5K3 350 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 CYP4F11Q9HBI6 524 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 COQ4Q9Y3A0 265 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 INSL5Q9Y5Q6 135 aa18.02■□□□□ 0.48
PDCD2-213ENST00000544866 PRRG1O14668 218 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 CCL16O15467 120 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 PCSK1P29120 753 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 ELF1P32519 619 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 ASPAP45381 313 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 RAP1GAPP47736 663 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 NOP14P78316 857 aaKnown RBP18.01■□□□□ 0.47
PDCD2-213ENST00000544866 ZP2Q05996 745 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 CCDC142Q17RM4 750 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 KLHL40Q2TBA0 621 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 ATAT1Q5SQI0 421 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 CAVIN1Q6NZI2 390 aaKnown RBP18.01■□□□□ 0.47
PDCD2-213ENST00000544866 SCARA5Q6ZMJ2 495 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 DCP1BQ8IZD4 617 aaKnown RBP18.01■□□□□ 0.47
PDCD2-213ENST00000544866 ATAD1Q8NBU5 361 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 CNOT6LQ96LI5 555 aaKnown RBP18.01■□□□□ 0.47
PDCD2-213ENST00000544866 NECAB3Q96P71 396 aaPredicted RBP18.01■□□□□ 0.47
PDCD2-213ENST00000544866 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.01■□□□□ 0.47
PDCD2-213ENST00000544866 TMLHEQ9NVH6 421 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 RAB20Q9NX57 234 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 PRKAG3Q9UGI9 489 aa18.01■□□□□ 0.47
PDCD2-213ENST00000544866 CLSTN1O94985 981 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 CCDC192P0DO97 292 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 FMO5P49326 533 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 CDR1P51861 262 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 CDH8P55286 799 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 DUSP4Q13115 394 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 SASS6Q6UVJ0 657 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 ADHFE1Q8IWW8 467 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 TTC9BQ8N6N2 239 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 C2orf15Q8WU43 125 aaKnown RBP18■□□□□ 0.47
PDCD2-213ENST00000544866 SYT15Q9BQS2 421 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 PHF7Q9BWX1 381 aaPredicted RBP18■□□□□ 0.47
PDCD2-213ENST00000544866 BCO2Q9BYV7 579 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 IMPG2Q9BZV3 1241 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 THAP9Q9H5L6 903 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 HSFX1Q9UBD0 423 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 YIPF1Q9Y548 306 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 GREB1Q4ZG55 1949 aa18■□□□□ 0.47
PDCD2-213ENST00000544866 MYO10Q9HD67 2058 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 MYBPHLA2RUH7 354 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 C19orf67A6NJJ6 358 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 PMM2O15305 246 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 ATP2C2O75185 946 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 LRG1P02750 347 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 P4HA1P13674 534 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 PTMSP20962 102 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 GNL1P36915 607 aaPredicted RBP17.99■□□□□ 0.47
PDCD2-213ENST00000544866 PSMC1P62191 440 aaKnown RBP17.99■□□□□ 0.47
PDCD2-213ENST00000544866 SMARCB1Q12824 385 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 STX1AQ16623 288 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 FAM171BQ6P995 826 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 C11orf57Q6ZUT1 292 aaPredicted RBP17.99■□□□□ 0.47
PDCD2-213ENST00000544866 OR6B3Q8NGW1 331 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 UHRF1Q96T88 793 aaPredicted RBP17.99■□□□□ 0.47
PDCD2-213ENST00000544866 SNX25Q9H3E2 840 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 WDR6Q9NNW5 1121 aaKnown RBP17.99■□□□□ 0.47
PDCD2-213ENST00000544866 CRTAC1Q9NQ79 661 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 ANO10Q9NW15 660 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 GTF3C4Q9UKN8 822 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 CDH9Q9ULB4 789 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 MYH10P35580 1976 aa17.99■□□□□ 0.47
PDCD2-213ENST00000544866 CLUHO75153 1309 aa17.98■□□□□ 0.47
PDCD2-213ENST00000544866 XYLBO75191 536 aa17.98■□□□□ 0.47
PDCD2-213ENST00000544866 PDGFRBP09619 1106 aa17.98■□□□□ 0.47
PDCD2-213ENST00000544866 TWF1Q12792 350 aa17.98■□□□□ 0.47
PDCD2-213ENST00000544866 KCNH2Q12809 1159 aa17.98■□□□□ 0.47
PDCD2-213ENST00000544866 NFE2Q16621 373 aaPredicted RBP17.98■□□□□ 0.47
PDCD2-213ENST00000544866 CCDC150Q8NCX0 1101 aa17.98■□□□□ 0.47
PDCD2-213ENST00000544866 SPPL2BQ8TCT7 592 aa17.98■□□□□ 0.47
PDCD2-213ENST00000544866 NIF3L1Q9GZT8 377 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms