RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 LACRTQ9GZZ8 138 aa10.74□□□□□ -0.69
MDH1-216ENST00000544381 APOBEC3GQ9HC16 384 aaKnown RBP10.74□□□□□ -0.69
MDH1-216ENST00000544381 TRIM10Q9UDY6 481 aa10.74□□□□□ -0.69
MDH1-216ENST00000544381 NAGPAQ9UK23 515 aa10.74□□□□□ -0.69
MDH1-216ENST00000544381 TFR2Q9UP52 801 aa10.74□□□□□ -0.69
MDH1-216ENST00000544381 DERAQ9Y315 318 aa10.74□□□□□ -0.69
MDH1-216ENST00000544381 NUB1Q9Y5A7 615 aa10.74□□□□□ -0.69
MDH1-216ENST00000544381 PCDHB4Q9Y5E5 795 aa10.74□□□□□ -0.69
MDH1-216ENST00000544381 COL4A4P53420 1690 aaPredicted RBP10.74□□□□□ -0.69
MDH1-216ENST00000544381 MACROD2A1Z1Q3 448 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 DCDC2CA8MYV0 355 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 DDX3XO00571 662 aaKnown RBP eCLIP10.73□□□□□ -0.692e-24■■■□□ 17.1
MDH1-216ENST00000544381 PJA2O43164 708 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 ABL1P00519 1130 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 ATICP31939 592 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 CYP2C18P33260 490 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 NAP1L1P55209 391 aaKnown RBP10.73□□□□□ -0.69
MDH1-216ENST00000544381 YWHAEP62258 255 aaKnown RBP10.73□□□□□ -0.69
MDH1-216ENST00000544381 RBP5P82980 135 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 PPIGQ13427 754 aaKnown RBP eCLIP10.73□□□□□ -0.695e-8■□□□□ 11.1
MDH1-216ENST00000544381 NR6A1Q15406 480 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 GLYCTKQ8IVS8 523 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 HACE1Q8IYU2 909 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 RPUSD2Q8IZ73 545 aaKnown RBP10.73□□□□□ -0.69
MDH1-216ENST00000544381 SLC43A3Q8NBI5 491 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 HERVK_113Q902F9 699 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 DHX38Q92620 1227 aaKnown RBP10.73□□□□□ -0.69
MDH1-216ENST00000544381 SECISBP2LQ93073 1101 aaKnown RBP10.73□□□□□ -0.69
MDH1-216ENST00000544381 WNT8BQ93098 351 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 SNX27Q96L92 541 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 WDR24Q96S15 920 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 TSPAN18Q96SJ8 248 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 UHRF1Q96T88 793 aaPredicted RBP10.73□□□□□ -0.69
MDH1-216ENST00000544381 APOL6Q9BWW8 343 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 SEZ6LQ9BYH1 1024 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 PPP1R12CQ9BZL4 782 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 NIF3L1Q9GZT8 377 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 NKX2-4Q9H2Z4 354 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 NXF3Q9H4D5 531 aaKnown RBP10.73□□□□□ -0.69
MDH1-216ENST00000544381 CHST12Q9NRB3 414 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 TRMT13Q9NUP7 481 aaKnown RBP10.73□□□□□ -0.69
MDH1-216ENST00000544381 DPP3Q9NY33 737 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 PARP2Q9UGN5 583 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 ITGA11Q9UKX5 1188 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 ST3GAL5Q9UNP4 418 aa10.73□□□□□ -0.69
MDH1-216ENST00000544381 TANC1Q9C0D5 1861 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 MUC6Q6W4X9 2439 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 CTAGE9A4FU28 777 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 ARVCFO00192 962 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 MEFVO15553 781 aaPredicted RBP10.72□□□□□ -0.69
MDH1-216ENST00000544381 XPOTO43592 962 aaKnown RBP10.72□□□□□ -0.69
MDH1-216ENST00000544381 CAND2O75155 1236 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 TACC1O75410 805 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 RECQL4O94761 1208 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 ITGB3P05106 788 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 H2AFZP0C0S5 128 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 BMP1P13497 986 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 P4HA1P13674 534 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 SNRPBP14678 240 aaKnown RBP10.72□□□□□ -0.69
MDH1-216ENST00000544381 MYOGP15173 224 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 CYP11B1P15538 503 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 ZSCAN20P17040 1043 aaPredicted RBP10.72□□□□□ -0.69
MDH1-216ENST00000544381 MGAT3Q09327 533 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 CCDC85BQ15834 202 aaPredicted RBP10.72□□□□□ -0.69
MDH1-216ENST00000544381 ZNF667Q5HYK9 610 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 UBXN11Q5T124 520 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 TAF3Q5VWG9 929 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 H2AFVQ71UI9 128 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 NOP9Q86U38 636 aaKnown RBP10.72□□□□□ -0.69
MDH1-216ENST00000544381 SLC47A2Q86VL8 602 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 SLC35F6Q8N357 371 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 RNF10Q8N5U6 811 aaKnown RBP10.72□□□□□ -0.69
MDH1-216ENST00000544381 C1orf127Q8N9H9 656 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 BEST2Q8NFU1 509 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 SLC30A5Q8TAD4 765 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 LNX1Q8TBB1 728 aaPredicted RBP10.72□□□□□ -0.69
MDH1-216ENST00000544381 SLC20A1Q8WUM9 679 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 ALS2CR12Q96Q35 445 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 GAS2L1Q99501 681 aaPredicted RBP10.72□□□□□ -0.69
MDH1-216ENST00000544381 ARID3AQ99856 593 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 SYT11Q9BT88 431 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 C1QTNF2Q9BXJ5 285 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 WNT8AQ9H1J5 351 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 NXF1Q9UBU9 619 aaKnown RBP10.72□□□□□ -0.69
MDH1-216ENST00000544381 FKBPLQ9UIM3 349 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 SIX4Q9UIU6 781 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 INTUQ9ULD6 942 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 AGAP1Q9UPQ3 857 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 HES2Q9Y543 173 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 IPPQ9Y573 584 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 PCDHB2Q9Y5E7 798 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 RALGAPA2Q2PPJ7 1873 aa10.72□□□□□ -0.69
MDH1-216ENST00000544381 ATP8B3O60423 1300 aa10.71□□□□□ -0.69
MDH1-216ENST00000544381 TMCO5BA8MYB1 307 aa10.71□□□□□ -0.69
MDH1-216ENST00000544381 URI1O94763 535 aaPredicted RBP10.71□□□□□ -0.69
MDH1-216ENST00000544381 ARHGEF15O94989 841 aa10.71□□□□□ -0.69
MDH1-216ENST00000544381 ACO1P21399 889 aaKnown RBP10.71□□□□□ -0.69
MDH1-216ENST00000544381 AKAP5P24588 427 aa10.71□□□□□ -0.69
MDH1-216ENST00000544381 POLR2BP30876 1174 aaKnown RBP10.71□□□□□ -0.69
MDH1-216ENST00000544381 MRPS5P82675 430 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms