RNA–Protein interactions for RNA: ENST00000544344.5

CD4-212, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 1,056 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-212ENST00000544344 ZNF638Q14966 1978 aaKnown RBP16.78■□□□□ 0.28
CD4-212ENST00000544344 C1QTNF9BB2RNN3 333 aa16.78■□□□□ 0.28
CD4-212ENST00000544344 GIPC1O14908 333 aa16.78■□□□□ 0.28
CD4-212ENST00000544344 ATG13O75143 517 aa16.78■□□□□ 0.28
CD4-212ENST00000544344 RNF40O75150 1001 aa16.78■□□□□ 0.28
CD4-212ENST00000544344 C1QTNF9P0C862 333 aa16.78■□□□□ 0.28
CD4-212ENST00000544344 CDC25CP30307 473 aa16.78■□□□□ 0.28
CD4-212ENST00000544344 GRSF1Q12849 480 aaKnown RBP eCLIP16.78■□□□□ 0.28
CD4-212ENST00000544344 KRT79Q5XKE5 535 aa16.78■□□□□ 0.28
CD4-212ENST00000544344 RNF43Q68DV7 783 aa16.78■□□□□ 0.28
CD4-212ENST00000544344 ARMCX5Q6P1M9 558 aa16.78■□□□□ 0.28
CD4-212ENST00000544344 LRRTM3Q86VH5 581 aa16.78■□□□□ 0.28
CD4-212ENST00000544344 EZH1Q92800 747 aaPredicted RBP16.78■□□□□ 0.28
CD4-212ENST00000544344 USP13Q92995 863 aaPredicted RBP16.78■□□□□ 0.28
CD4-212ENST00000544344 PNMA5Q96PV4 448 aa16.78■□□□□ 0.28
CD4-212ENST00000544344 SEPT5Q99719 369 aaPredicted RBP16.78■□□□□ 0.28
CD4-212ENST00000544344 TMEM121BQ9BXQ6 578 aaPredicted RBP16.78■□□□□ 0.28
CD4-212ENST00000544344 RAB34Q9BZG1 259 aa16.78■□□□□ 0.28
CD4-212ENST00000544344 AKAP13Q12802 2813 aa16.78■□□□□ 0.28
CD4-212ENST00000544344 NUP205Q92621 2012 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 PIRO00625 290 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 ODC1P11926 461 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 ARSAP15289 507 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 U2AF2P26368 475 aaKnown RBP eCLIP16.77■□□□□ 0.28
CD4-212ENST00000544344 NMT1P30419 496 aaKnown RBP16.77■□□□□ 0.28
CD4-212ENST00000544344 TUFMP49411 452 aaKnown RBP16.77■□□□□ 0.28
CD4-212ENST00000544344 SMTNP53814 917 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 NCKAP1LP55160 1127 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 PTPAQ15257 358 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 MGAT5BQ3V5L5 792 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 SLC39A12Q504Y0 691 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 HYIQ5T013 277 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 C9orf57Q5W0N0 161 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 JADE1Q6IE81 842 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 SYT2Q8N9I0 419 aaPredicted RBP16.77■□□□□ 0.28
CD4-212ENST00000544344 GIPC2Q8TF65 315 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 HHIPQ96QV1 700 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 TSPAN18Q96SJ8 248 aa16.77■□□□□ 0.28
CD4-212ENST00000544344 NOL7Q9UMY1 257 aaKnown RBP16.77■□□□□ 0.28
CD4-212ENST00000544344 ABCA7Q8IZY2 2146 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 NPHP3-ACAD11A0A0J9YXS1 232 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 ANO9A1A5B4 782 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 DCLK1O15075 740 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 XPOTO43592 962 aaKnown RBP16.76■□□□□ 0.27
CD4-212ENST00000544344 F11P03951 625 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 HAPLN1P10915 354 aaPredicted RBP16.76■□□□□ 0.27
CD4-212ENST00000544344 HMGA1P17096 107 aaKnown RBP16.76■□□□□ 0.27
CD4-212ENST00000544344 PRPHP41219 470 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 MATR3P43243 847 aaKnown RBP eCLIP16.76■□□□□ 0.27
CD4-212ENST00000544344 GALK1P51570 392 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 SLC12A3P55017 1021 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 NLRP12P59046 1061 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 VEPH1Q14D04 833 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 UNQ6494/PRO21346Q6UXR6 183 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 CCDC83Q8IWF9 413 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 EDEM2Q9BV94 578 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 KCNG1Q9UIX4 513 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 ZMIZ1Q9ULJ6 1067 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 TBX20Q9UMR3 447 aa16.76■□□□□ 0.27
CD4-212ENST00000544344 BCLAF3A2AJT9 711 aaKnown RBP16.75■□□□□ 0.27
CD4-212ENST00000544344 C4orf47A7E2U8 309 aa16.75■□□□□ 0.27
CD4-212ENST00000544344 OGTO15294 1046 aa16.75■□□□□ 0.27
CD4-212ENST00000544344 PIGRP01833 764 aa16.75■□□□□ 0.27
CD4-212ENST00000544344 NFICP08651 508 aa16.75■□□□□ 0.27
CD4-212ENST00000544344 HOXB3P14651 431 aaPredicted RBP16.75■□□□□ 0.27
CD4-212ENST00000544344 ARSHQ5FYA8 562 aa16.75■□□□□ 0.27
CD4-212ENST00000544344 SLC39A4Q6P5W5 647 aa16.75■□□□□ 0.27
CD4-212ENST00000544344 MAB21L3Q8N8X9 362 aa16.75■□□□□ 0.27
CD4-212ENST00000544344 KDF1Q8NAX2 398 aaPredicted RBP16.75■□□□□ 0.27
CD4-212ENST00000544344 LLPHQ9BRT6 129 aaKnown RBP16.75■□□□□ 0.27
CD4-212ENST00000544344 RPF1Q9H9Y2 349 aaKnown RBP16.75■□□□□ 0.27
CD4-212ENST00000544344 TDP1Q9NUW8 608 aa16.75■□□□□ 0.27
CD4-212ENST00000544344 ZMYM5Q9UJ78 669 aa16.75■□□□□ 0.27
CD4-212ENST00000544344 CPSF3Q9UKF6 684 aaKnown RBP16.75■□□□□ 0.27
CD4-212ENST00000544344 TCHHQ07283 1943 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 A0A0B4J269 797 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 LNP1A1A4G5 178 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 LAD1O00515 517 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 DRD1P21728 446 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 PAX3P23760 479 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 GJA4P35212 333 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 NOVA1P51513 510 aaKnown RBP16.74■□□□□ 0.27
CD4-212ENST00000544344 KYAT1Q16773 422 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 TXNDC8Q6A555 127 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 SYT13Q7L8C5 426 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 STKLD1Q8NE28 680 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 RPLP0P6Q8NHW5 317 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 C2orf15Q8WU43 125 aaKnown RBP16.74■□□□□ 0.27
CD4-212ENST00000544344 BICD1Q96G01 975 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 GCNAQ96QF7 691 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 PLIN2Q99541 437 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.74■□□□□ 0.27
CD4-212ENST00000544344 KCND2Q9NZV8 630 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 EBF1Q9UH73 591 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 PKD1L2Q7Z442 2459 aa16.74■□□□□ 0.27
CD4-212ENST00000544344 HNRNPDLO14979 420 aaKnown RBP16.73■□□□□ 0.27
CD4-212ENST00000544344 TADA3O75528 432 aa16.73■□□□□ 0.27
CD4-212ENST00000544344 CAVIN2O95810 425 aa16.73■□□□□ 0.27
CD4-212ENST00000544344 TOP3BO95985 862 aaKnown RBP16.73■□□□□ 0.27
CD4-212ENST00000544344 PLA2G4BP0C869 781 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms