RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 DCP1BQ8IZD4 617 aaKnown RBP16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 ADGRF2Q8IZF7 708 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 ELMOD1Q8N336 334 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 SPPL2BQ8TCT7 592 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 RSAD2Q8WXG1 361 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 SMARCE1Q969G3 411 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 GTPBP4Q9BZE4 634 aaKnown RBP16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 VRTNQ9H8Y1 702 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 TMLHEQ9NVH6 421 aa16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 DDX43Q9NXZ2 648 aaKnown RBP16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 MRPS23Q9Y3D9 190 aaKnown RBP16.58■□□□□ 0.24
ECHDC2-223ENST00000542552 NRG2O14511 850 aaPredicted RBP16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 MOSPD3O75425 235 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 VNN1O95497 513 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 WARSP23381 471 aaKnown RBP16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 RPL13P26373 211 aaKnown RBP16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 ATICP31939 592 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 ALDH1A3P47895 512 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 TUFMP49411 452 aaKnown RBP16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 EPHB3P54753 998 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 MYL6P60660 151 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 MYL7Q01449 175 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 TSPY1Q01534 308 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 ADAM9Q13443 819 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 ZACNQ401N2 412 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 INTS6LQ5JSJ4 861 aaKnown RBP16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 CEP135Q66GS9 1140 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 IQCEQ6IPM2 695 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 HFE2Q6ZVN8 426 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 TMC8Q8IU68 726 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 HS6ST3Q8IZP7 471 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 ADSSL1Q8N142 457 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 SLC44A3Q8N4M1 653 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 LEMD2Q8NC56 503 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 TCEAL4Q96EI5 215 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 GDE1Q9NZC3 331 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 DUSP12Q9UNI6 340 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 ASB3Q9Y575 518 aa16.57■□□□□ 0.24
ECHDC2-223ENST00000542552 ZNF197O14709 1029 aa16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 HCRTO43612 131 aa16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 TACC1O75410 805 aa16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 SOAT2O75908 522 aa16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 HAPLN1P10915 354 aaPredicted RBP16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 CEBPBP17676 345 aa16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 ACAT1P24752 427 aaKnown RBP16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 PCSK1P29120 753 aa16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 PSMC2P35998 433 aaKnown RBP16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 UBE2HP62256 183 aa16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 TRPC3Q13507 836 aa16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 NFE2Q16621 373 aaPredicted RBP16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 CYP4A22Q5TCH4 519 aa16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 FAM171BQ6P995 826 aa16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 PARM1Q6UWI2 310 aa16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 INTS8Q75QN2 995 aaKnown RBP16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 PDZD4Q76G19 769 aaPredicted RBP16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 ZC3H3Q8IXZ2 948 aaKnown RBP16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 FGF14Q92915 247 aa16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 PSMG2Q969U7 264 aa16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 SYAP1Q96A49 352 aaPredicted RBP16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 PCDHB5Q9Y5E4 795 aa16.56■□□□□ 0.24
ECHDC2-223ENST00000542552 PHACTR2O75167 634 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 ATF6P18850 670 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 BMP6P22004 513 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 LMO2P25791 158 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 VAMP7P51809 220 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 CDR1P51861 262 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 NCOA4Q13772 614 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 WDR72Q3MJ13 1102 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 CLEC17AQ6ZS10 378 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 MTSS1LQ765P7 747 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 SV2AQ7L0J3 742 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 DNAJB7Q7Z6W7 309 aaPredicted RBP16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 FAM186BQ8IYM0 893 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 ING5Q8WYH8 240 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 MMS19Q96T76 1030 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 MKNK1Q9BUB5 465 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 RPP25Q9BUL9 199 aaKnown RBP16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 ABCB6Q9NP58 842 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 ASAH2Q9NR71 780 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 MAN1B1Q9UKM7 699 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 GTF3C4Q9UKN8 822 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 NUMBLQ9Y6R0 609 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 ZNF318Q5VUA4 2279 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 ZDBF2Q9HCK1 2354 aa16.55■□□□□ 0.24
ECHDC2-223ENST00000542552 MYBPHLA2RUH7 354 aa16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 NARSO43776 548 aaKnown RBP16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 PMS1P54277 932 aaKnown RBP16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 TNNC1P63316 161 aa16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 BIRC3Q13489 604 aa16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 CCDC142Q17RM4 750 aa16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 MGAT5BQ3V5L5 792 aa16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 CFAP221Q4G0U5 840 aa16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 ANKRD40Q6AI12 368 aa16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 ITIH5Q86UX2 942 aa16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 SHKBP1Q8TBC3 707 aa16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 PBXIP1Q96AQ6 731 aa16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 MCRS1Q96EZ8 462 aa16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 SEPT5Q99719 369 aaPredicted RBP16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 MRPL45Q9BRJ2 306 aaKnown RBP16.54■□□□□ 0.24
ECHDC2-223ENST00000542552 ZNF334Q9HCZ1 680 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms