RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 PPP2R5AQ15172 486 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 CCDC96Q2M329 555 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 BMP2KLQ5H9B9 411 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 CCDC181Q5TID7 509 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 CD276Q5ZPR3 534 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 SNRNP48Q6IEG0 339 aaKnown RBP6.2□□□□□ -1.42
CPSF7-220ENST00000541963 ESRP1Q6NXG1 681 aaKnown RBP6.2□□□□□ -1.42
CPSF7-220ENST00000541963 NOL8Q76FK4 1167 aaKnown RBP6.2□□□□□ -1.42
CPSF7-220ENST00000541963 RALYLQ86SE5 291 aaKnown RBP6.2□□□□□ -1.42
CPSF7-220ENST00000541963 FMNL3Q8IVF7 1028 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 CHST13Q8NET6 341 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 U2AF1L4Q8WU68 220 aaKnown RBP6.2□□□□□ -1.42
CPSF7-220ENST00000541963 CPA5Q8WXQ8 436 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 TRIB2Q92519 343 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 FUBP3Q96I24 572 aaKnown RBP eCLIP6.2□□□□□ -1.42
CPSF7-220ENST00000541963 DEFB118Q96PH6 123 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 DIRC2Q96SL1 478 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 NUP88Q99567 741 aaPredicted RBP6.2□□□□□ -1.42
CPSF7-220ENST00000541963 TMEM47Q9BQJ4 181 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 UBAC1Q9BSL1 405 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 HTATIP2Q9BUP3 242 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.2□□□□□ -1.423e-8■■■□□ 15.8
CPSF7-220ENST00000541963 NSUN3Q9H649 340 aaKnown RBP6.2□□□□□ -1.42
CPSF7-220ENST00000541963 KAT14Q9H8E8 782 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 SLC38A10Q9HBR0 1119 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 FBXO28Q9NVF7 368 aa6.2□□□□□ -1.42
CPSF7-220ENST00000541963 GREB1LQ9C091 1923 aaPredicted RBP6.2□□□□□ -1.42
CPSF7-220ENST00000541963 NMT2O60551 498 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 MT-CO1P00395 513 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 AOAHP28039 575 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 ERVK-21P61565 698 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 SLC6A3Q01959 620 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 GPATCH4Q5T3I0 446 aaKnown RBP6.19□□□□□ -1.42
CPSF7-220ENST00000541963 IFIT1BQ5T764 474 aaKnown RBP6.19□□□□□ -1.42
CPSF7-220ENST00000541963 PRAMEF9Q5VWM5 478 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 TBC1D10CQ8IV04 446 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 ANKRD35Q8N283 1001 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 MSL3Q8N5Y2 521 aaKnown RBP6.19□□□□□ -1.42
CPSF7-220ENST00000541963 REPS2Q8NFH8 660 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 NCOA7Q8NI08 942 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 IGDCC4Q8TDY8 1250 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 ANKS1AQ92625 1134 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 MAP4K1Q92918 833 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 LIN37Q96GY3 246 aaPredicted RBP6.19□□□□□ -1.42
CPSF7-220ENST00000541963 FAXDC2Q96IV6 333 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 MAML3Q96JK9 1138 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 RAVER2Q9HCJ3 691 aaKnown RBP6.19□□□□□ -1.42
CPSF7-220ENST00000541963 UCKL1Q9NWZ5 548 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 NRBP1Q9UHY1 535 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 TNKSO95271 1327 aa6.19□□□□□ -1.42
CPSF7-220ENST00000541963 RBBP6Q7Z6E9 1792 aaKnown RBP6.18□□□□□ -1.42
CPSF7-220ENST00000541963 KLHL33A6NCF5 533 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 FARP2O94887 1054 aaPredicted RBP6.18□□□□□ -1.42
CPSF7-220ENST00000541963 TMEM253P0C7T8 217 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 PDHBP11177 359 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 PFKPQ01813 784 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 PTH1RQ03431 593 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 MCL1Q07820 350 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 TRAF1Q13077 416 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 ACAP2Q15057 778 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 CCL14Q16627 93 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 UGT8Q16880 541 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 MAP3K21Q5TCX8 1036 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 SLFN12LQ6IEE8 588 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 CCDC174Q6PII3 467 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 BTNL9Q6UXG8 535 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 CILP2Q8IUL8 1156 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 CHPFQ8IZ52 775 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 TMTC2Q8N394 836 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 TMEM209Q96SK2 561 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 MPHOSPH6Q99547 160 aaKnown RBP6.18□□□□□ -1.42
CPSF7-220ENST00000541963 FOXB1Q99853 325 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 ANO3Q9BYT9 981 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 SLC13A1Q9BZW2 595 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 WNT8AQ9H1J5 351 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 ACAD9Q9H845 621 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 SLC39A2Q9NP94 309 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 LUC7LQ9NQ29 371 aaKnown RBP6.18□□□□□ -1.42
CPSF7-220ENST00000541963 OGDHLQ9ULD0 1010 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 CNPY2Q9Y2B0 182 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 NR2E3Q9Y5X4 410 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 NEDD4P46934 1319 aa6.18□□□□□ -1.42
CPSF7-220ENST00000541963 RLFQ13129 1914 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 ASB14A6NK59 587 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 ZNF839A8K0R7 811 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 B4DLN1 442 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 E7EWF7 191 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 IFIT3O14879 490 aaKnown RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 SEPT4O43236 478 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 XPOTO43592 962 aaKnown RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 DHX16O60231 1041 aaKnown RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 CYP7B1O75881 506 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 PRPF6O94906 941 aaKnown RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 PAPLNO95428 1278 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 ICAM1P05362 532 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 PGK2P07205 417 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 CYP21A2P08686 494 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 PARP1P09874 1014 aaKnown RBP6.17□□□□□ -1.42
CPSF7-220ENST00000541963 SNHG28P0DPA3 235 aa6.17□□□□□ -1.42
CPSF7-220ENST00000541963 ALAS1P13196 640 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms