RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 ATL2Q8NHH9 583 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 C1orf54Q8WWF1 131 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 SNF8Q96H20 258 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 CCT8L2Q96SF2 557 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 GDF15Q99988 308 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 IMPG2Q9BZV3 1241 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.8□□□□□ -0.84
DDB1-211ENST00000538280 XYLT2Q9H1B5 865 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 ADAM7Q9H2U9 754 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 SEMA4AQ9H3S1 761 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 AZI2Q9H6S1 392 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 PARVAQ9NVD7 372 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 RBPJLQ9UBG7 517 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 IP6K2Q9UHH9 426 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 R3HDM2Q9Y2K5 976 aaKnown RBP9.8□□□□□ -0.84
DDB1-211ENST00000538280 NR2E3Q9Y5X4 410 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 FAM169AQ9Y6X4 670 aa9.8□□□□□ -0.84
DDB1-211ENST00000538280 SPTBN5Q9NRC6 3674 aaKnown RBP9.79□□□□□ -0.84
DDB1-211ENST00000538280 VCANP13611 3396 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 A0A087WUV0 522 aaPredicted RBP9.79□□□□□ -0.84
DDB1-211ENST00000538280 GMNCA6NCL1 334 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 TRIM66O15016 1216 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 ASAP2O43150 1006 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 HBP1O60381 514 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 TCEA3O75764 348 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 GAS8O95995 478 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 RALAP11233 206 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 EIF4BP23588 611 aaKnown RBP9.79□□□□□ -0.84
DDB1-211ENST00000538280 HPDP32754 393 aaPredicted RBP9.79□□□□□ -0.84
DDB1-211ENST00000538280 ASPAP45381 313 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 MYL6P60660 151 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 TAP1Q03518 808 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 CALCOCO2Q13137 446 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 AUHQ13825 339 aaKnown RBP9.79□□□□□ -0.84
DDB1-211ENST00000538280 TFDP1Q14186 410 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 PPP1R7Q15435 360 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 MAPK6Q16659 721 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 FAM187BQ17R55 369 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 DUOXA2Q1HG44 320 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 SEZ6Q53EL9 994 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 ANKS1BQ7Z6G8 1248 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 PASD1Q8IV76 773 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 WDTC1Q8N5D0 677 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 TMEM35BQ8NCS4 154 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 BBOF1Q8ND07 529 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 PXYLP1Q8TE99 480 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 ATXN2LQ8WWM7 1075 aaKnown RBP9.79□□□□□ -0.84
DDB1-211ENST00000538280 ATG4AQ8WYN0 398 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 RAPGEF5Q92565 580 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 BCO2Q9BYV7 579 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 OSBPL8Q9BZF1 889 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 FOXP3Q9BZS1 431 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 MTMR12Q9C0I1 747 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 RASSF4Q9H2L5 321 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 CDC42EP4Q9H3Q1 356 aaKnown RBP9.79□□□□□ -0.84
DDB1-211ENST00000538280 MROH8Q9H579 483 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 CCDC134Q9H6E4 229 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 TXNRD2Q9NNW7 524 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 CISHQ9NSE2 258 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 TNFSF13BQ9Y275 285 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 RALGAPA2Q2PPJ7 1873 aa9.79□□□□□ -0.84
DDB1-211ENST00000538280 CUL9Q8IWT3 2517 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 CDH23Q9H251 3354 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 A0A1W2PPC1 479 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 IL18RAPO95256 599 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 C22orf31O95567 290 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 HARSP12081 509 aaKnown RBP9.78□□□□□ -0.84
DDB1-211ENST00000538280 FGFR4P22455 802 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 KLRC2P26717 231 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 CDR1P51861 262 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 SEC24CP53992 1094 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 COPS2P61201 443 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 YWHAEP62258 255 aaKnown RBP9.78□□□□□ -0.84
DDB1-211ENST00000538280 OGDHQ02218 1023 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 MBTD1Q05BQ5 628 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 CCDC142Q17RM4 750 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 Q3C1V9 767 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 C2CD6Q53TS8 623 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 ERMARDQ5T6L9 678 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 ATF7IP2Q5U623 682 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 EEF1DP3Q658K8 133 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 MICALCLQ6ZW33 695 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 ZBTB33Q86T24 672 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 TRIM50Q86XT4 487 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 RCOR2Q8IZ40 523 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 LRRC71Q8N4P6 559 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 RNF149Q8NC42 400 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 TRIB2Q92519 343 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 RBM41Q96IZ5 413 aaKnown RBP9.78□□□□□ -0.84
DDB1-211ENST00000538280 SERPINB12Q96P63 405 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 SLITRK1Q96PX8 696 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 XPO6Q96QU8 1125 aaKnown RBP9.78□□□□□ -0.84
DDB1-211ENST00000538280 MMP19Q99542 508 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 CDT1Q9H211 546 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 LHX5Q9H2C1 402 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 CENPHQ9H3R5 247 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 SMARCAD1Q9H4L7 1026 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 VRTNQ9H8Y1 702 aa9.78□□□□□ -0.84
DDB1-211ENST00000538280 PRMT7Q9NVM4 692 aaPredicted RBP9.78□□□□□ -0.84
DDB1-211ENST00000538280 BCCIPQ9P287 314 aaKnown RBP eCLIP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms