RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 FAM110CQ1W6H9 321 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 SLC10A6Q3KNW5 377 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 ODF2Q5BJF6 829 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 CYP4A22Q5TCH4 519 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 RNF25Q96BH1 459 aaPredicted RBP16.57■□□□□ 0.24
MKS1-204ENST00000537529 SLITRK1Q96PX8 696 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 GBA2Q9HCG7 927 aaPredicted RBP16.57■□□□□ 0.24
MKS1-204ENST00000537529 ITGA11Q9UKX5 1188 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 NOVA2Q9UNW9 492 aaKnown RBP16.57■□□□□ 0.24
MKS1-204ENST00000537529 C2CD2Q9Y426 696 aa16.57■□□□□ 0.24
MKS1-204ENST00000537529 CDH8P55286 799 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 GUCY1A3Q02108 690 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 LMNB2Q03252 620 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 PTPN11Q06124 597 aaPredicted RBP16.56■□□□□ 0.24
MKS1-204ENST00000537529 ACVR2BQ13705 512 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 GPR162Q16538 588 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 IQSEC1Q6DN90 963 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 FOXR1Q6PIV2 292 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 ZNF365Q70YC5 407 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 TRMT10CQ7L0Y3 403 aaKnown RBP16.56■□□□□ 0.24
MKS1-204ENST00000537529 APBB1IPQ7Z5R6 666 aaPredicted RBP16.56■□□□□ 0.24
MKS1-204ENST00000537529 NT5DC4Q86YG4 428 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 BBOF1Q8ND07 529 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 CXorf38Q8TB03 319 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 BCAS4Q8TDM0 211 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 ACAP3Q96P50 834 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 TINF2Q9BSI4 451 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 WDR35Q9P2L0 1181 aa16.56■□□□□ 0.24
MKS1-204ENST00000537529 F8VP50 259 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 CILPO75339 1184 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 SHBGP04278 402 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 LSP1P33241 339 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 PTPN7P35236 360 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 PPP2R2AP63151 447 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 OGDHQ02218 1023 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 SLC29A2Q14542 456 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 DCAF4L1Q3SXM0 396 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 PTPN20Q4JDL3 420 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 CCDC25Q86WR0 208 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 SLC4A11Q8NBS3 891 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 TMEM176AQ96HP8 235 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 HPDLQ96IR7 371 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 SEMA4AQ9H3S1 761 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 FAM124BQ9H5Z6 455 aaPredicted RBP16.55■□□□□ 0.24
MKS1-204ENST00000537529 KLHL11Q9NVR0 708 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 SLC5A4Q9NY91 659 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 RSPH14Q9UHP6 348 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 A0A1B0GUA9 196 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 RRN3P2A6NIE6 340 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 SLC15A5A6NIM6 579 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 SIGLEC16A6NMB1 481 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 SRRM3A6NNA2 597 aaPredicted RBP16.55■□□□□ 0.24
MKS1-204ENST00000537529 PI4K2BG5E9Z4 385 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 GOLGA8SH3BPF8 625 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 RIPK2O43353 540 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 TJP3O95049 919 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 FGFR4P22455 802 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 CDR1P51861 262 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 GSCP56915 257 aaPredicted RBP16.55■□□□□ 0.24
MKS1-204ENST00000537529 MAGOHP61326 146 aaKnown RBP16.55■□□□□ 0.24
MKS1-204ENST00000537529 RBP5P82980 135 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 ADCY2Q08462 1091 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 MARCH8Q5T0T0 291 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 SPRYD7Q5W111 196 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 RHBDF2Q6PJF5 856 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 ILDR2Q71H61 639 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 KIAA0319LQ8IZA0 1049 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 TTC39CQ8N584 583 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 CCDC89Q8N998 374 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 TLCD1Q96CP7 247 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 PGM2Q96G03 612 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 TMEM109Q9BVC6 243 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 TRAIPQ9BWF2 469 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 ELOVL4Q9GZR5 314 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 SYNCQ9H7C4 482 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 AGAP1Q9UPQ3 857 aa16.55■□□□□ 0.24
MKS1-204ENST00000537529 STAU1O95793 577 aaKnown RBP16.54■□□□□ 0.24
MKS1-204ENST00000537529 KRT3P12035 628 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 TCF4P15884 667 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 PSMA2P25787 234 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 ADCY8P40145 1251 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 GRM5P41594 1212 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 PSMC1P62191 440 aaKnown RBP16.54■□□□□ 0.24
MKS1-204ENST00000537529 BYSLQ13895 437 aaKnown RBP16.54■□□□□ 0.24
MKS1-204ENST00000537529 SPOCD1Q6ZMY3 1216 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 POLNQ7Z5Q5 900 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 C2orf69Q8N8R5 385 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 DPP3Q9NY33 737 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 ANAPC5Q9UJX4 755 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 NEU2Q9Y3R4 380 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 EVPLQ92817 2033 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 MICAL2O94851 1124 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 VDRP11473 427 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 ATF7P17544 494 aaPredicted RBP16.54■□□□□ 0.24
MKS1-204ENST00000537529 IVDP26440 423 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 ITGA8P53708 1063 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 TRIP13Q15645 432 aaPredicted RBP16.54■□□□□ 0.24
MKS1-204ENST00000537529 PTGISQ16647 500 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 SKIDA1Q1XH10 827 aa16.54■□□□□ 0.24
MKS1-204ENST00000537529 ATP13A4Q4VNC1 1196 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms