RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 MAP2K1Q02750 393 aaPredicted RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 PTP4A2Q12974 167 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 AUHQ13825 339 aaKnown RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 RASA3Q14644 834 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 MESDQ14696 234 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 CNGA2Q16280 664 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 RSPO4Q2I0M5 234 aaPredicted RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 WLSQ5T9L3 541 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 ACAD10Q6JQN1 1059 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 CCDC137Q6PK04 289 aaKnown RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 HAUS6Q7Z4H7 955 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 CPLX4Q7Z7G2 160 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 FAM228AQ86W67 206 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 LDHDQ86WU2 507 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 C4orf19Q8IY42 314 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 FUKQ8N0W3 1084 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 MDM1Q8TC05 714 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 ZNF526Q8TF50 670 aaPredicted RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 FAM151AQ8WW52 585 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 MAIP1Q8WWC4 291 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 CLEC4DQ8WXI8 215 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 DDX1Q92499 740 aaKnown RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 SEMA4DQ92854 862 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 KCNN1Q92952 543 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 KAT5Q92993 513 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 ZKSCAN4Q969J2 545 aaPredicted RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 PRMT6Q96LA8 375 aaPredicted RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 CCDC114Q96M63 670 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 FBXL18Q96ME1 805 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 SERPINB12Q96P63 405 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 JPH2Q9BR39 696 aaPredicted RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 CBWD1Q9BRT8 395 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 TAOK3Q9H2K8 898 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 SEMA4AQ9H3S1 761 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 AZI2Q9H6S1 392 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 ZFYVE28Q9HCC9 887 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 AGO4Q9HCK5 861 aaKnown RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 TMEM8AQ9HCN3 771 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 AVENQ9NQS1 362 aaPredicted RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 ANKEF1Q9NU02 776 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 SEPT11Q9NVA2 429 aaKnown RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 MAP3K20Q9NYL2 800 aaKnown RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 HSPBP1Q9NZL4 362 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 TRPC5Q9UL62 973 aaPredicted RBP6.11□□□□□ -1.43
VPS33A-203ENST00000536212 ZBTB21Q9ULJ3 1066 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 SLC12A4Q9UP95 1085 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 KCNH4Q9UQ05 1017 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 PCDHGC4Q9Y5F7 938 aa6.11□□□□□ -1.43
VPS33A-203ENST00000536212 TCRBV7S2A1N4TA0A589 114 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 CFAP73A6NFT4 308 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 TMEM110-MUSTN1A8MSY1 372 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 TISP43B9A030 160 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 C2CD2LO14523 706 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 RASGRF2O14827 1237 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 CYP26A1O43174 497 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 MGRN1O60291 552 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 ZC3H11AO75152 810 aaKnown RBP eCLIP6.1□□□□□ -1.43
VPS33A-203ENST00000536212 ICAM1P05362 532 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 CYP11B1P15538 503 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 ITIH2P19823 946 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 IVDP26440 423 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 MAN1A1P33908 653 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 CAP2P40123 477 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 QARSP47897 775 aaKnown RBP6.1□□□□□ -1.43
VPS33A-203ENST00000536212 GCLMP48507 274 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 CAV1Q03135 178 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 RIPK1Q13546 671 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 TNIP1Q15025 636 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 CLEC16AQ2KHT3 1053 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 GALNTL6Q49A17 601 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 NKAPLQ5M9Q1 402 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 FKBP1CQ5VVH2 108 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 PCNX4Q63HM2 1172 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 KRT39Q6A163 491 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 ZNF746Q6NUN9 644 aaPredicted RBP6.1□□□□□ -1.43
VPS33A-203ENST00000536212 CYB5D1Q6P9G0 228 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 CCDC174Q6PII3 467 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 MIGA2Q7L4E1 593 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 ENOSF1Q7L5Y1 443 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 ADAT2Q7Z6V5 191 aaKnown RBP6.1□□□□□ -1.43
VPS33A-203ENST00000536212 EXOC3L1Q86VI1 746 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 RELL1Q8IUW5 271 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 MAP4K3Q8IVH8 894 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 LRRC34Q8IZ02 419 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 SPICE1Q8N0Z3 855 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 ANKS4BQ8N8V4 417 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 FLAD1Q8NFF5 587 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 RDM1Q8NG50 284 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 ZNF564Q8TBZ8 553 aaPredicted RBP6.1□□□□□ -1.43
VPS33A-203ENST00000536212 PARD3BQ8TEW8 1205 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 CCDC74AQ96AQ1 378 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 FAM81BQ96LP2 452 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 MFSD14AQ96MC6 490 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 NTPCRQ9BSD7 190 aaKnown RBP6.1□□□□□ -1.43
VPS33A-203ENST00000536212 NUP85Q9BW27 656 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 NSRP1Q9H0G5 558 aaKnown RBP6.1□□□□□ -1.43
VPS33A-203ENST00000536212 PCIF1Q9H4Z3 704 aa6.1□□□□□ -1.43
VPS33A-203ENST00000536212 INTS9Q9NV88 658 aaKnown RBP6.1□□□□□ -1.43
VPS33A-203ENST00000536212 ABI2Q9NYB9 513 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms