RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, humanhuman

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-238ENST00000534647 PRR7Q8TB68 274 aa12.51□□□□□ -0.41
CTNND1-238ENST00000534647 AK8Q96MA6 479 aa12.51□□□□□ -0.41
CTNND1-238ENST00000534647 LRRC3BQ96PB8 259 aa12.51□□□□□ -0.41
CTNND1-238ENST00000534647 PGLYRP2Q96PD5 576 aa12.51□□□□□ -0.41
CTNND1-238ENST00000534647 RPF1Q9H9Y2 349 aaKnown RBP12.51□□□□□ -0.41
CTNND1-238ENST00000534647 ZMYM5Q9UJ78 669 aa12.51□□□□□ -0.41
CTNND1-238ENST00000534647 CPSF3Q9UKF6 684 aaKnown RBP12.51□□□□□ -0.41
CTNND1-238ENST00000534647 USP18Q9UMW8 372 aa12.51□□□□□ -0.41
CTNND1-238ENST00000534647 DNAH14Q0VDD8 3507 aa12.51□□□□□ -0.41
CTNND1-238ENST00000534647 EPG5Q9HCE0 2579 aa12.51□□□□□ -0.41
CTNND1-238ENST00000534647 ANO9A1A5B4 782 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 SOBPA7XYQ1 873 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 SPECC1L-ADORA2AF8WAN1 911 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 SLC30A4O14863 429 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 ODC1P11926 461 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 NDUFV2P19404 249 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 CTHP32929 405 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 MATR3P43243 847 aaKnown RBP eCLIP12.5□□□□□ -0.41
CTNND1-238ENST00000534647 LIG4P49917 911 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 KPNA1P52294 538 aaPredicted RBP12.5□□□□□ -0.41
CTNND1-238ENST00000534647 SPEM2Q0P670 501 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 SMARCB1Q12824 385 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 SIM2Q14190 667 aaPredicted RBP12.5□□□□□ -0.41
CTNND1-238ENST00000534647 ELOAQ14241 798 aaKnown RBP12.5□□□□□ -0.41
CTNND1-238ENST00000534647 CSRP2Q16527 193 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 ARHGAP15Q53QZ3 475 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 WDR44Q5JSH3 913 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 NETO1Q8TDF5 533 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 C2orf15Q8WU43 125 aaKnown RBP12.5□□□□□ -0.41
CTNND1-238ENST00000534647 BICD1Q96G01 975 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 CDK5RAP3Q96JB5 506 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 TMX3Q96JJ7 454 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 SENP8Q96LD8 212 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 ASB7Q9H672 318 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 TASP1Q9H6P5 420 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 DSEQ9UL01 958 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 SLC27A5Q9Y2P5 690 aa12.5□□□□□ -0.41
CTNND1-238ENST00000534647 PDCD11Q14690 1871 aaKnown RBP12.49□□□□□ -0.41
CTNND1-238ENST00000534647 NPHP3-ACAD11A0A0J9YXS1 232 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 VWA3AA6NCI4 1184 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 SLC38A8A6NNN8 435 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 HNRNPDLO14979 420 aaKnown RBP12.49□□□□□ -0.41
CTNND1-238ENST00000534647 GTF2BQ00403 316 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 CCINQ13939 588 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 ZRSR1Q15695 479 aaKnown RBP12.49□□□□□ -0.41
CTNND1-238ENST00000534647 STXBP5Q5T5C0 1151 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 C9orf57Q5W0N0 161 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 JADE1Q6IE81 842 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 TXNDC11Q6PKC3 985 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 TMEM130Q8N3G9 435 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 CNTNAP3BQ96NU0 1288 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 PLIN2Q99541 437 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 REEP2Q9BRK0 252 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 ANP32EQ9BTT0 268 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 CNTNAP3Q9BZ76 1288 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 CCSER1Q9C0I3 900 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 ZCWPW1Q9H0M4 648 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 ATXN3LQ9H3M9 355 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 ST6GALNAC4Q9H4F1 302 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 IL21Q9HBE4 155 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 PARVGQ9HBI0 331 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 SEMA4GQ9NTN9 838 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 C2CD2Q9Y426 696 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 STYXL1Q9Y6J8 313 aa12.49□□□□□ -0.41
CTNND1-238ENST00000534647 ACACBO00763 2458 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 TPRP12270 2363 aaKnown RBP12.48□□□□□ -0.41
CTNND1-238ENST00000534647 CCDC163A0A0D9SF12 145 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 DCDC2BA2VCK2 349 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 CHURC1-FNTBB4DL54 471 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 PPEF2O14830 753 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 ADRB1P08588 477 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 GABRR2P28476 465 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 CDC25CP30307 473 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 SOX9P48436 509 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 FNTBP49356 437 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 GUCY2FP51841 1108 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 PTPAQ15257 358 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 GPR158Q5T848 1215 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 SLC39A4Q6P5W5 647 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 WDR5BQ86VZ2 330 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 MYCT1Q8N699 235 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 OR10T2Q8NGX3 314 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 BPIFB1Q8TDL5 484 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 CALML4Q96GE6 196 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 TMEM209Q96SK2 561 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 FIZ1Q96SL8 496 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 MSTO1Q9BUK6 570 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 RBM12Q9NTZ6 932 aaKnown RBP12.48□□□□□ -0.41
CTNND1-238ENST00000534647 BLOC1S4Q9NUP1 217 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 THG1LQ9NWX6 298 aaKnown RBP12.48□□□□□ -0.41
CTNND1-238ENST00000534647 GTSE1Q9NYZ3 720 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 TICRRQ7Z2Z1 1910 aa12.48□□□□□ -0.41
CTNND1-238ENST00000534647 SPTBN2O15020 2390 aa12.47□□□□□ -0.41
CTNND1-238ENST00000534647 UBA7P41226 1012 aa12.47□□□□□ -0.41
CTNND1-238ENST00000534647 DMWDQ09019 674 aa12.47□□□□□ -0.41
CTNND1-238ENST00000534647 CUL4AQ13619 759 aa12.47□□□□□ -0.41
CTNND1-238ENST00000534647 TMEM132DQ14C87 1099 aa12.47□□□□□ -0.41
CTNND1-238ENST00000534647 VEPH1Q14D04 833 aa12.47□□□□□ -0.41
CTNND1-238ENST00000534647 LPAL2Q16609 132 aa12.47□□□□□ -0.41
CTNND1-238ENST00000534647 ITPRIPL2Q3MIP1 535 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms