RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 GKN1Q9NS71 199 aa23.06■■□□□ 1.28
SSH3-211ENST00000534112 CNOT1A5YKK6 2376 aaKnown RBP23.05■■□□□ 1.28
SSH3-211ENST00000534112 PTPAQ15257 358 aa23.05■■□□□ 1.28
SSH3-211ENST00000534112 THEM5Q8N1Q8 247 aa23.05■■□□□ 1.28
SSH3-211ENST00000534112 C2orf15Q8WU43 125 aaKnown RBP23.05■■□□□ 1.28
SSH3-211ENST00000534112 CALML4Q96GE6 196 aa23.05■■□□□ 1.28
SSH3-211ENST00000534112 FIZ1Q96SL8 496 aa23.05■■□□□ 1.28
SSH3-211ENST00000534112 FAM83CQ9BQN1 747 aa23.05■■□□□ 1.28
SSH3-211ENST00000534112 ASB7Q9H672 318 aa23.05■■□□□ 1.28
SSH3-211ENST00000534112 BLOC1S4Q9NUP1 217 aa23.05■■□□□ 1.28
SSH3-211ENST00000534112 C2CD2Q9Y426 696 aa23.05■■□□□ 1.28
SSH3-211ENST00000534112 ANKRD63C9JTQ0 380 aa23.04■■□□□ 1.28
SSH3-211ENST00000534112 AXIN1O15169 862 aa23.04■■□□□ 1.28
SSH3-211ENST00000534112 UBA7P41226 1012 aa23.04■■□□□ 1.28
SSH3-211ENST00000534112 GTF2BQ00403 316 aa23.04■■□□□ 1.28
SSH3-211ENST00000534112 SMARCB1Q12824 385 aa23.04■■□□□ 1.28
SSH3-211ENST00000534112 WSCD1Q658N2 575 aa23.04■■□□□ 1.28
SSH3-211ENST00000534112 PKN3Q6P5Z2 889 aa23.04■■□□□ 1.28
SSH3-211ENST00000534112 CMTM8Q8IZV2 173 aa23.04■■□□□ 1.28
SSH3-211ENST00000534112 SPPL2BQ8TCT7 592 aa23.04■■□□□ 1.28
SSH3-211ENST00000534112 PYM1Q9BRP8 204 aaKnown RBP23.04■■□□□ 1.28
SSH3-211ENST00000534112 ZHX3Q9H4I2 956 aa23.04■■□□□ 1.28
SSH3-211ENST00000534112 ZMYM5Q9UJ78 669 aa23.04■■□□□ 1.28
SSH3-211ENST00000534112 MAP1BP46821 2468 aaKnown RBP23.03■■□□□ 1.28
SSH3-211ENST00000534112 KRT18P05783 430 aaKnown RBP23.03■■□□□ 1.28
SSH3-211ENST00000534112 HAPLN1P10915 354 aaPredicted RBP23.03■■□□□ 1.28
SSH3-211ENST00000534112 NMT1P30419 496 aaKnown RBP23.03■■□□□ 1.28
SSH3-211ENST00000534112 PXNP49023 591 aaPredicted RBP23.03■■□□□ 1.28
SSH3-211ENST00000534112 TAF6P49848 677 aa23.03■■□□□ 1.28
SSH3-211ENST00000534112 MCM6Q14566 821 aa23.03■■□□□ 1.28
SSH3-211ENST00000534112 TMEM196Q5HYL7 178 aa23.03■■□□□ 1.28
SSH3-211ENST00000534112 ADALQ6DHV7 355 aa23.03■■□□□ 1.28
SSH3-211ENST00000534112 TMEM150AQ86TG1 271 aa23.03■■□□□ 1.28
SSH3-211ENST00000534112 GAB3Q8WWW8 586 aa23.03■■□□□ 1.28
SSH3-211ENST00000534112 DDX1Q92499 740 aaKnown RBP23.03■■□□□ 1.28
SSH3-211ENST00000534112 HPS4Q9NQG7 708 aa23.03■■□□□ 1.28
SSH3-211ENST00000534112 DPP3Q9NY33 737 aa23.03■■□□□ 1.28
SSH3-211ENST00000534112 ABI2Q9NYB9 513 aaPredicted RBP23.03■■□□□ 1.28
SSH3-211ENST00000534112 MYH11P35749 1972 aa23.03■■□□□ 1.28
SSH3-211ENST00000534112 CCDC163A0A0D9SF12 145 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 OTOL1A6NHN0 477 aaPredicted RBP23.02■■□□□ 1.28
SSH3-211ENST00000534112 TISP43B9A030 160 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 H3BQV1 296 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 ABCD1P33897 745 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 AVPR1AP37288 418 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 GRSF1Q12849 480 aaKnown RBP eCLIP23.02■■□□□ 1.28
SSH3-211ENST00000534112 RUNX3Q13761 415 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 ZC2HC1CQ53FD0 456 aaPredicted RBP23.02■■□□□ 1.28
SSH3-211ENST00000534112 FSTL4Q6MZW2 842 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 CACNA2D4Q7Z3S7 1137 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 MAB21L3Q8N8X9 362 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 LOXL4Q96JB6 756 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 CCSER1Q9C0I3 900 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 ARRDC1-AS1Q9H2J1 176 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 EBF3Q9H4W6 596 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 CCL26Q9Y258 94 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 STYXL1Q9Y6J8 313 aa23.02■■□□□ 1.28
SSH3-211ENST00000534112 ZFHX4Q86UP3 3567 aa23.01■■□□□ 1.27
SSH3-211ENST00000534112 TRDMT1O14717 391 aaKnown RBP23.01■■□□□ 1.27
SSH3-211ENST00000534112 ATG13O75143 517 aa23.01■■□□□ 1.27
SSH3-211ENST00000534112 TBCAO75347 108 aaKnown RBP23.01■■□□□ 1.27
SSH3-211ENST00000534112 RPP40O75818 363 aaKnown RBP23.01■■□□□ 1.27
SSH3-211ENST00000534112 F11P03951 625 aa23.01■■□□□ 1.27
SSH3-211ENST00000534112 HMGA1P17096 107 aaKnown RBP23.01■■□□□ 1.27
SSH3-211ENST00000534112 PLCG1P19174 1290 aa23.01■■□□□ 1.27
SSH3-211ENST00000534112 NLRP12P59046 1061 aa23.01■■□□□ 1.27
SSH3-211ENST00000534112 SF3A2Q15428 464 aaKnown RBP23.01■■□□□ 1.27
SSH3-211ENST00000534112 ST3GAL2Q16842 350 aa23.01■■□□□ 1.27
SSH3-211ENST00000534112 AASDHQ4L235 1098 aaPredicted RBP23.01■■□□□ 1.27
SSH3-211ENST00000534112 TRIM68Q6AZZ1 485 aa23.01■■□□□ 1.27
SSH3-211ENST00000534112 IL31Q6EBC2 164 aa23.01■■□□□ 1.27
SSH3-211ENST00000534112 SLFN12LQ6IEE8 588 aa23.01■■□□□ 1.27
SSH3-211ENST00000534112 DCP1BQ8IZD4 617 aaKnown RBP23.01■■□□□ 1.27
SSH3-211ENST00000534112 RAD54LQ92698 747 aa23.01■■□□□ 1.27
SSH3-211ENST00000534112 USP13Q92995 863 aaPredicted RBP23.01■■□□□ 1.27
SSH3-211ENST00000534112 CHFRQ96EP1 664 aa23.01■■□□□ 1.27
SSH3-211ENST00000534112 AGO2Q9UKV8 859 aaKnown RBP23.01■■□□□ 1.27
SSH3-211ENST00000534112 SLC8A2Q9UPR5 921 aa23.01■■□□□ 1.27
SSH3-211ENST00000534112 ZNF806P0C7X5 589 aa23■■□□□ 1.27
SSH3-211ENST00000534112 KCNA4P22459 653 aa23■■□□□ 1.27
SSH3-211ENST00000534112 DDX6P26196 483 aaKnown RBP eCLIP23■■□□□ 1.27
SSH3-211ENST00000534112 RAP1GAPP47736 663 aa23■■□□□ 1.27
SSH3-211ENST00000534112 LIMK1P53667 647 aa23■■□□□ 1.27
SSH3-211ENST00000534112 POU5F1Q01860 360 aaKnown RBP23■■□□□ 1.27
SSH3-211ENST00000534112 BFSP1Q12934 665 aa23■■□□□ 1.27
SSH3-211ENST00000534112 KARSQ15046 597 aaKnown RBP23■■□□□ 1.27
SSH3-211ENST00000534112 CCDC6Q16204 474 aa23■■□□□ 1.27
SSH3-211ENST00000534112 TXNDC8Q6A555 127 aa23■■□□□ 1.27
SSH3-211ENST00000534112 KBTBD6Q86V97 674 aa23■■□□□ 1.27
SSH3-211ENST00000534112 TDP1Q9NUW8 608 aa23■■□□□ 1.27
SSH3-211ENST00000534112 PCDHB5Q9Y5E4 795 aa23■■□□□ 1.27
SSH3-211ENST00000534112 KPNA7A9QM74 516 aa22.99■■□□□ 1.27
SSH3-211ENST00000534112 GJB2P29033 226 aa22.99■■□□□ 1.27
SSH3-211ENST00000534112 CRELD2Q6UXH1 353 aaPredicted RBP22.99■■□□□ 1.27
SSH3-211ENST00000534112 EFCAB13Q8IY85 973 aa22.99■■□□□ 1.27
SSH3-211ENST00000534112 C12orf50Q8NA57 414 aaPredicted RBP22.99■■□□□ 1.27
SSH3-211ENST00000534112 RASSF8Q8NHQ8 419 aa22.99■■□□□ 1.27
SSH3-211ENST00000534112 ST6GALNAC4Q9H4F1 302 aa22.99■■□□□ 1.27
SSH3-211ENST00000534112 RXFP3Q9NSD7 469 aa22.99■■□□□ 1.27
SSH3-211ENST00000534112 TMLHEQ9NVH6 421 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms