RNA–Protein interactions for RNA: ENST00000527018.5

CTSC-204, Transcript of cathepsin C, human

TSL 5

Gene CTSC, Length 733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-204	ENST00000527018	OBP2A	Q9NY56	170 aa		11.43	□□□□□ -0.58
CTSC-204	ENST00000527018	ABI2	Q9NYB9	513 aa	Predicted RBP	11.43	□□□□□ -0.58
CTSC-204	ENST00000527018	DSE	Q9UL01	958 aa		11.43	□□□□□ -0.58
CTSC-204	ENST00000527018	MAP1B	P46821	2468 aa	Known RBP	11.43	□□□□□ -0.58
CTSC-204	ENST00000527018	HELZ	P42694	1942 aa	Known RBP	11.43	□□□□□ -0.58
CTSC-204	ENST00000527018	TISP43	B9A030	160 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	PIR	O00625	290 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	SLC26A4	O43511	780 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	LRP3	O75074	770 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	ADRB2	P07550	413 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	ATF6	P18850	670 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	ABCD1	P33897	745 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	CNR2	P34972	360 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	MCM2	P49736	904 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	ZNF131	P52739	623 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	PLCB2	Q00722	1185 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	PTPA	Q15257	358 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	ITPRIPL2	Q3MIP1	535 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	WDR44	Q5JSH3	913 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	SPPL2B	Q8TCT7	592 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	NETO1	Q8TDF5	533 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	LRRC15	Q8TF66	581 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	LARP4B	Q92615	738 aa	Known RBP	11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	TMX3	Q96JJ7	454 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	ZCWPW1	Q9H0M4	648 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	ASB7	Q9H672	318 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	SEMA4G	Q9NTN9	838 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	C2orf42	Q9NWW7	574 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	DPP3	Q9NY33	737 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	HSFX1	Q9UBD0	423 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	AGO2	Q9UKV8	859 aa	Known RBP	11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	SMC3	Q9UQE7	1217 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	DERA	Q9Y315	318 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	KIAA1549L	Q6ZVL6	1849 aa		11.42	□□□□□ -0.58
CTSC-204	ENST00000527018	ANO9	A1A5B4	782 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018		K7ESF4	209 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	BMP15	O95972	392 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	CYP11A1	P05108	521 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	LONP1	P36776	959 aa	Known RBP	11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	AVPR1A	P37288	418 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	GTF2B	Q00403	316 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	BFSP1	Q12934	665 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	SV2C	Q496J9	727 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	C8orf34	Q49A92	452 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	PPM1J	Q5JR12	505 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	WSCD1	Q658N2	575 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	LARP1B	Q659C4	914 aa	Known RBP	11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	SLFN12L	Q6IEE8	588 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	PRR23C	Q6ZRP0	262 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	DYM	Q7RTS9	669 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	DCP1B	Q8IZD4	617 aa	Known RBP	11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	KRI1	Q8N9T8	703 aa	Known RBP	11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	TTC16	Q8NEE8	873 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	NOC3L	Q8WTT2	800 aa	Known RBP	11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	POMGNT1	Q8WZA1	660 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	ZNF560	Q96MR9	790 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	SLC46A2	Q9BY10	475 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	IL21	Q9HBE4	155 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	GKN1	Q9NS71	199 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	C2CD2	Q9Y426	696 aa		11.41	□□□□□ -0.58
CTSC-204	ENST00000527018	CHD8	Q9HCK8	2581 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	NUP205	Q92621	2012 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	THADA	Q6YHU6	1953 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	KPNA7	A9QM74	516 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	SLC30A4	O14863	429 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	GDF9	O60383	454 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	PRPF40A	O75400	957 aa	Known RBP	11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	PAPSS2	O95340	614 aa	Predicted RBP	11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	CCDC192	P0DO97	292 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	HAPLN1	P10915	354 aa	Predicted RBP	11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	HOXC13	P31276	330 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	PXN	P49023	591 aa	Predicted RBP	11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	TSPY1	Q01534	308 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	GRIN1	Q05586	938 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	SMARCB1	Q12824	385 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	CSRP2	Q16527	193 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	AASDH	Q4L235	1098 aa	Predicted RBP	11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	CC2D1A	Q6P1N0	951 aa	Predicted RBP	11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	LRRTM3	Q86VH5	581 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	WDR5B	Q86VZ2	330 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	SFR1	Q86XK3	245 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	CMTM8	Q8IZV2	173 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	SYNPO	Q8N3V7	929 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	FAM160A2	Q8N612	972 aa	Predicted RBP	11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	MAB21L3	Q8N8X9	362 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	STKLD1	Q8NE28	680 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	C2orf15	Q8WU43	125 aa	Known RBP	11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	KCNN1	Q92952	543 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	FIZ1	Q96SL8	496 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	PI4K2A	Q9BTU6	479 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	IKZF4	Q9H2S9	585 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	SLC8A2	Q9UPR5	921 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	PCDHB5	Q9Y5E4	795 aa		11.4	□□□□□ -0.58
CTSC-204	ENST00000527018	AXIN1	O15169	862 aa		11.39	□□□□□ -0.59
CTSC-204	ENST00000527018	EXTL3	O43909	919 aa		11.39	□□□□□ -0.59
CTSC-204	ENST00000527018	IL18RAP	O95256	599 aa		11.39	□□□□□ -0.59
CTSC-204	ENST00000527018	CD2BP2	O95400	341 aa	Known RBP	11.39	□□□□□ -0.59
CTSC-204	ENST00000527018	WEE1	P30291	646 aa		11.39	□□□□□ -0.59
CTSC-204	ENST00000527018	GPR15	P49685	360 aa		11.39	□□□□□ -0.59

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