RNA–Protein interactions for RNA: ENST00000519952.5

R3HCC1-205, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-205ENST00000519952 ITGA4P13612 1032 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 GNG11P61952 73 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 ETF1P62495 437 aaKnown RBP13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 ZNF667Q5HYK9 610 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 UBXN11Q5T124 520 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 SPOPLQ6IQ16 392 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 KIF18AQ8NI77 898 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 SEPT8Q92599 483 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 KAT5Q92993 513 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 FAM84AQ96KN4 292 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 AGPAT1Q99943 283 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 FTHL17Q9BXU8 183 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 ERVK-5Q9HDB9 667 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 SEPT11Q9NVA2 429 aaKnown RBP13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 MYO1AQ9UBC5 1043 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 PADI3Q9ULW8 664 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 REXO2Q9Y3B8 237 aaKnown RBP13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 IPPQ9Y573 584 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 NUB1Q9Y5A7 615 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 PAXBP1Q9Y5B6 917 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 PCDHB4Q9Y5E5 795 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 PCDHB2Q9Y5E7 798 aa13.11□□□□□ -0.31
R3HCC1-205ENST00000519952 A0A087X0T9 212 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 ABHD14A-ACY1A0A1B0GW23 586 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 NCK2O43639 380 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 NBNO60934 754 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 RECQL4O94761 1208 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 ITGB3P05106 788 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 FAM228BP0C875 321 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 GHRP10912 638 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 ATF7P17544 494 aaPredicted RBP13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 AKAP5P24588 427 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 CD52P31358 61 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 CASQ1P31415 396 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 RAB27AP51159 221 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 PDE6CP51160 858 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 MYO1EQ12965 1108 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 IKBKEQ14164 716 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 LPIN1Q14693 890 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 MBTPS1Q14703 1052 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 GPNMBQ14956 572 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 NAB2Q15742 525 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 PLEKHG4Q58EX7 1191 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 ALKAL1Q6UXT8 129 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 NIF3L1Q9GZT8 377 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 NXF3Q9H4D5 531 aaKnown RBP13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 APOBEC3GQ9HC16 384 aaKnown RBP13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 RNF216Q9NWF9 866 aaPredicted RBP13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 CNTN3Q9P232 1028 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 UBQLN1Q9UMX0 589 aaKnown RBP13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 GUCA1BQ9UMX6 200 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 AGAP1Q9UPQ3 857 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 HES2Q9Y543 173 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 ASPMQ8IZT6 3477 aa13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 PDCD11Q14690 1871 aaKnown RBP13.1□□□□□ -0.31
R3HCC1-205ENST00000519952 GPR179Q6PRD1 2367 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 GPM6BQ13491 265 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 ALKBH5Q6P6C2 394 aaKnown RBP13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 CNKSR3Q6P9H4 555 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 SYT10Q6XYQ8 523 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 ZNF677Q86XU0 584 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 TTC39CQ8N584 583 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 C1orf127Q8N9H9 656 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 SMG8Q8ND04 991 aaKnown RBP13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 ELMO3Q96BJ8 720 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 PGBD4Q96DM1 585 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 HPDLQ96IR7 371 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 PDCL3Q9H2J4 239 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 AGO3Q9H9G7 860 aaKnown RBP13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 UBN1Q9NPG3 1134 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 FAM105AQ9NUU6 356 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 KLK14Q9P0G3 267 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 NXF1Q9UBU9 619 aaKnown RBP13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 DNAI1Q9UI46 699 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 CD207Q9UJ71 328 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 NAGPAQ9UK23 515 aa13.09□□□□□ -0.31
R3HCC1-205ENST00000519952 SMIM28A0A1B0GU29 152 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 LOC730098B7Z3J9 87 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 ZNF263O14978 683 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 MEFVO15553 781 aaPredicted RBP13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 PJA2O43164 708 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 STAU1O95793 577 aaKnown RBP13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 H2AFZP0C0S5 128 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 KCNE1P15382 129 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 CYP11B1P15538 503 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 CYP3A5P20815 502 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 POLR2BP30876 1174 aaKnown RBP13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 ARHGAP25P42331 645 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 NAP1L1P55209 391 aaKnown RBP13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 TNNC1P63316 161 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 CTC1Q2NKJ3 1217 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 WDR72Q3MJ13 1102 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 ZNF569Q5MCW4 686 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 TMEM270Q6UE05 265 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 H2AFVQ71UI9 128 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 GLYCTKQ8IVS8 523 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 DBF4BQ8NFT6 615 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 SLC30A5Q8TAD4 765 aa13.08□□□□□ -0.32
R3HCC1-205ENST00000519952 RIPOR3Q96MK2 946 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms