RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 FAM133AQ8N9E0 248 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 GSDMBQ8TAX9 411 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 RIN3Q8TB24 985 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 SCFD1Q8WVM8 642 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 ATXN2LQ8WWM7 1075 aaKnown RBP5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 STMN2Q93045 179 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 HPS3Q969F9 1004 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 RHOVQ96L33 236 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 BIRC8Q96P09 236 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZNF184Q99676 751 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 MIPEPQ99797 713 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 DPH2Q9BQC3 489 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 UBAC1Q9BSL1 405 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 HERC2P3Q9BVR0 1158 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 SHCBP1LQ9BZQ2 653 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 LRRC27Q9C0I9 530 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 DDX47Q9H0S4 455 aaKnown RBP5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 SERHL2Q9H4I8 314 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 TCP11L1Q9NUJ3 509 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 ARHGEF38Q9NXL2 777 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 HSFX1Q9UBD0 423 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 TUBE1Q9UJT0 475 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 DNAJC12Q9UKB3 198 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZMYND8Q9ULU4 1186 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 EXOC7Q9UPT5 735 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 DMTF1Q9Y222 760 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 STK38LQ9Y2H1 464 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 TBC1D30Q9Y2I9 924 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZBTB1Q9Y2K1 713 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 SNX14Q9Y5W7 946 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 CAPN6Q9Y6Q1 641 aa5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 DNMT1P26358 1616 aaKnown RBP5.08□□□□□ -1.6
HMGB1P19-201ENST00000517578 GRIN2BQ13224 1484 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 ABCC10Q5T3U5 1492 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 ADCY9O60503 1353 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 TMEM94Q12767 1356 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZNF233A6NK53 670 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 SNTNA6NMZ2 147 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 KIF28PB7ZC32 967 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 B8ZZF3 427 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 H3BS24 57 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 MAPK13O15264 365 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 ALOX15BO15296 676 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 CTNND1O60716 968 aaKnown RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 DCTN3O75935 186 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 UNC5CO95185 931 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 EYA4O95677 639 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 ITGB3P05106 788 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 UBTFL6P0CB48 400 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 TGFB3P10600 412 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 CTRB1P17538 263 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 PLCG1P19174 1290 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 CDH3P22223 829 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 CMA1P23946 247 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 HPDP32754 393 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 GDNFP39905 211 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 SLC1A1P43005 524 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 GSSP48637 474 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 SARSP49591 514 aaKnown RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 BCAP31P51572 246 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 HNRNPFP52597 415 aaKnown RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 ARFIP2P53365 341 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 B2MP61769 119 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 TNNC1P63316 161 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 COG7P83436 770 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 OCA2Q04671 838 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 RUNX1T1Q06455 604 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 ASPHQ12797 758 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 CETN1Q12798 172 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 RESTQ13127 1097 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 ACVR2BQ13705 512 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 NR1I3Q14994 352 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 PSMD6Q15008 389 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 PPP2R5EQ16537 467 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 PROSER3Q2NL68 480 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 RABL6Q3YEC7 729 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 FAM133BQ5BKY9 247 aaKnown RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 HERC4Q5GLZ8 1057 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 PPP6R3Q5H9R7 873 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 CCNJQ5T5M9 372 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZNF658Q5TYW1 1059 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 PRAMEF13Q5VWM6 474 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 FCRLBQ6BAA4 426 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 CTRB2Q6GPI1 263 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 PPP4R4Q6NUP7 873 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 LCNL1Q6ZST4 164 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 ARHGEF18Q6ZSZ5 1173 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 SYDE1Q6ZW31 735 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 KRT27Q7Z3Y8 459 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 C11orf96Q7Z7L8 435 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZC3H18Q86VM9 953 aaKnown RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 SIRT2Q8IXJ6 389 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 ZNF713Q8N859 430 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 ANKRD53Q8N9V6 530 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 SPATA5Q8NB90 893 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 FBXO27Q8NI29 283 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 OSCP1Q8WVF1 389 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 GATAD2BQ8WXI9 593 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 RAPGEF4Q8WZA2 1011 aa5.07□□□□□ -1.6
HMGB1P19-201ENST00000517578 BORCS5Q969J3 196 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms