RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 KCND2Q9NZV8 630 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 PHTF1Q9UMS5 762 aa11.37□□□□□ -0.59
PCDHGA1-202ENST00000517417 LRP6O75581 1613 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 EIF3EP60228 445 aaKnown RBP11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 NOP14P78316 857 aaKnown RBP11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 ROR1Q01973 937 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 POU5F1BQ06416 359 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 Q4G0T1 1027 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 ARHGEF19Q8IW93 802 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 CCNYL1Q8N7R7 359 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 AGAP3Q96P47 875 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 SH3GL3Q99963 347 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 SMARCAD1Q9H4L7 1026 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 SMG5Q9UPR3 1016 aaKnown RBP11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 PCDHB2Q9Y5E7 798 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 BAZ2AQ9UIF9 1905 aaKnown RBP11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 AHDC1Q5TGY3 1603 aaPredicted RBP11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 C5orf60A6NFR6 353 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 APRTP07741 180 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 SREBF1P36956 1147 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 SLC1A1P43005 524 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 SESN2P58004 480 aaPredicted RBP11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 NEU2Q9Y3R4 380 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 CCDC78A2IDD5 438 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 RALAP11233 206 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 ARFIP2P53365 341 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 ART3Q13508 389 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 MAP7Q14244 749 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 HYIQ5T013 277 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 CBWD2Q8IUF1 395 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 TEX9Q8N6V9 391 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 MAGEC3Q8TD91 643 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 DNAJC9Q8WXX5 260 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 NAF1Q96HR8 494 aaKnown RBP11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 TIPINQ9BVW5 301 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 IKZF4Q9H2S9 585 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 BFARQ9NZS9 450 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 ITGB4P16144 1822 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 IGSF9BQ9UPX0 1349 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 H0YGN5 161 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 CYP2B6P20813 491 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 MMP14P50281 582 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 AP3M2P53677 418 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 NCALDP61601 193 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 SATB1Q01826 763 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 TAF1BQ53T94 588 aaPredicted RBP11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 EFHC2Q5JST6 749 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 HABP4Q5JVS0 413 aaKnown RBP11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 EXOC3L1Q86VI1 746 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 SLC47A2Q86VL8 602 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 CDC26Q8NHZ8 85 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 CBWD1Q9BRT8 395 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 NAALADL1Q9UQQ1 740 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 NFS1Q9Y697 457 aa11.36□□□□□ -0.59
PCDHGA1-202ENST00000517417 ROBO3Q96MS0 1386 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 P4HA2O15460 535 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 ATP9BO43861 1147 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 MGRN1O60291 552 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 DRG2P55039 364 aaKnown RBP11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 KLC1Q07866 573 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 HIF1AQ16665 826 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 SGSM1Q2NKQ1 1148 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 SMTNL2Q2TAL5 461 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 RFX8Q6ZV50 586 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 OR6P1Q8NGX9 317 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 AFG1LQ8WV93 481 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 ALKBH8Q96BT7 664 aaKnown RBP11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 DNAJC18Q9H819 358 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 SENP1Q9P0U3 644 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 PCYOX1Q9UHG3 505 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 ANGPTL2Q9UKU9 493 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 EML1O00423 815 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 NFIBO00712 420 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 ZBTB39O15060 712 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 KPNA2P52292 529 aaKnown RBP11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 ACTR2P61160 394 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 TAF1CQ15572 869 aaPredicted RBP11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 KLHL38Q2WGJ6 581 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 TKFCQ3LXA3 575 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 EFCAB12Q6NXP0 572 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 TMEM154Q6P9G4 183 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 ATP11CQ8NB49 1132 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 PDZD8Q8NEN9 1154 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 AGR3Q8TD06 166 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 DTX3LQ8TDB6 740 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 OSBPL8Q9BZF1 889 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 TRIM33Q9UPN9 1127 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 PPP1R12AO14974 1030 aaPredicted RBP11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 PPP1R11O60927 126 aaPredicted RBP11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 ERFP50548 548 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 FOXD4Q12950 439 aaPredicted RBP11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 RRP1BQ14684 758 aaKnown RBP11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 RMDN2Q96LZ7 410 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 TMEM237Q96Q45 408 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 SENP7Q9BQF6 1050 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 DDX56Q9NY93 547 aaKnown RBP11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 TIAM2Q8IVF5 1701 aa11.35□□□□□ -0.59
PCDHGA1-202ENST00000517417 ICAM1P05362 532 aa11.34□□□□□ -0.59
PCDHGA1-202ENST00000517417 GZMAP12544 262 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms