RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 EIF3DO15371 548 aaKnown RBP eCLIP7.85□□□□□ -1.15
CLIP1-205ENST00000514271 MMP3P08254 477 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 NAT2P11245 290 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 ABCD1P33897 745 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 RWDD2BP57060 319 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 RPL26P61254 145 aaKnown RBP7.85□□□□□ -1.15
CLIP1-205ENST00000514271 KCNH2Q12809 1159 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 ZNF484Q5JVG2 852 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 SDCCAG8Q86SQ7 713 aaPredicted RBP7.85□□□□□ -1.15
CLIP1-205ENST00000514271 SYT2Q8N9I0 419 aaPredicted RBP7.85□□□□□ -1.15
CLIP1-205ENST00000514271 PTPRN2Q92932 1015 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 DEFB118Q96PH6 123 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 FMO2Q99518 471 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 TUFT1Q9NNX1 390 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 KCNH7Q9NS40 1196 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 DNAJB4Q9UDY4 337 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 POLIQ9UNA4 740 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 SQORQ9Y6N5 450 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 HAS3O00219 553 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 IPO5O00410 1097 aaKnown RBP7.85□□□□□ -1.15
CLIP1-205ENST00000514271 KIAA0754O94854 1291 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 F2P00734 622 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 ACTN1P12814 892 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 PTPN7P35236 360 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 TAZQ16635 292 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 COL13A1Q5TAT6 717 aaPredicted RBP7.85□□□□□ -1.15
CLIP1-205ENST00000514271 CES4AQ5XG92 561 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 ANKRD33Q7Z3H0 272 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 CCDC63Q8NA47 563 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 SLC35G2Q8TBE7 412 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 ZSWIM1Q9BR11 485 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 MKNK1Q9BUB5 465 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 AZI2Q9H6S1 392 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 ECT2Q9H8V3 914 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 TAS2R14Q9NYV8 317 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 ADAMTS1Q9UHI8 967 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 TRIM33Q9UPN9 1127 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 ARL2BPQ9Y2Y0 163 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 NR2E3Q9Y5X4 410 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 SLC4A7Q9Y6M7 1214 aa7.85□□□□□ -1.15
CLIP1-205ENST00000514271 ZNF638Q14966 1978 aaKnown RBP7.84□□□□□ -1.15
CLIP1-205ENST00000514271 NEFHP12036 1026 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 CHRNA3P32297 505 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 ADCYAP1R1P41586 468 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 ETV4P43268 484 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 GALCP54803 685 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 DHX9Q08211 1270 aaKnown RBP7.84□□□□□ -1.15
CLIP1-205ENST00000514271 RAPGEF1Q13905 1077 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 RPS6KA1Q15418 735 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 SEPT14Q6ZU15 432 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 CACNA2D4Q7Z3S7 1137 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 LSM14BQ9BX40 385 aaKnown RBP7.84□□□□□ -1.15
CLIP1-205ENST00000514271 MMADHCQ9H3L0 296 aaPredicted RBP7.84□□□□□ -1.15
CLIP1-205ENST00000514271 ERAP1Q9NZ08 941 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 MYH9P35579 1960 aaKnown RBP7.84□□□□□ -1.15
CLIP1-205ENST00000514271 UMODL1Q5DID0 1318 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 GAS7O60861 476 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 PFKMP08237 780 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 PDE6CP51160 858 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 ACLYP53396 1101 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 CLDN10P78369 228 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 DRICH1Q6PGQ1 229 aaPredicted RBP7.84□□□□□ -1.15
CLIP1-205ENST00000514271 CROCCP2Q86T23 111 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 CAGE1Q8TC20 777 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 C18orf8Q96DM3 657 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 CCDC114Q96M63 670 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 SPATA33Q96N06 139 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 AP1M1Q9BXS5 423 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 STK33Q9BYT3 514 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 NRBP2Q9NSY0 501 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 PCDHA10Q9Y5I2 948 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 MYLKQ15746 1914 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 BACH1O14867 736 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 HBP1O60381 514 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 PSMD10O75832 226 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 CD48P09326 243 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 ITGB5P18084 799 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 MARCKSL1P49006 195 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 MYO1EQ12965 1108 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 PCBP1Q15365 356 aaKnown RBP eCLIP7.84□□□□□ -1.15
CLIP1-205ENST00000514271 CALCRLQ16602 461 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 PPP1R15BQ5SWA1 713 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 CCDC70Q6NSX1 233 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 HIBCHQ6NVY1 386 aaPredicted RBP7.84□□□□□ -1.15
CLIP1-205ENST00000514271 MYOCDQ8IZQ8 938 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 GIPC2Q8TF65 315 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 GPR20Q99678 358 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 OCEL1Q9H607 264 aa7.84□□□□□ -1.15
CLIP1-205ENST00000514271 TRIM64A6NGJ6 449 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 ARVCFO00192 962 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 MED24O75448 989 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 SKAP2O75563 359 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 IPO7O95373 1038 aaKnown RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 TDP2O95551 362 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 CRABP2P29373 138 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 HOXC8P31273 242 aa7.83□□□□□ -1.16
CLIP1-205ENST00000514271 POLGP54098 1239 aaPredicted RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 POLR2FP61218 127 aaKnown RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 PURAQ00577 322 aaKnown RBP7.83□□□□□ -1.16
CLIP1-205ENST00000514271 AMPD3Q01432 767 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms