RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 CD101Q93033 1021 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 CHFRQ96EP1 664 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 SEPT5Q99719 369 aaPredicted RBP13.1□□□□□ -0.31
PTPN20-229ENST00000513756 LPIN3Q9BQK8 851 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 PLEKHA5Q9HAU0 1116 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 FBRSL1Q9HCM7 1045 aaKnown RBP13.1□□□□□ -0.31
PTPN20-229ENST00000513756 TDP1Q9NUW8 608 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 ORC3Q9UBD5 711 aaPredicted RBP13.1□□□□□ -0.31
PTPN20-229ENST00000513756 GPSM3Q9Y4H4 160 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 IGSF10Q6WRI0 2623 aa13.1□□□□□ -0.31
PTPN20-229ENST00000513756 FLNBO75369 2602 aaKnown RBP13.09□□□□□ -0.31
PTPN20-229ENST00000513756 SPAARA0A1B0GVQ0 90 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 EIF4E1BA6NMX2 242 aaKnown RBP13.09□□□□□ -0.31
PTPN20-229ENST00000513756 XPOTO43592 962 aaKnown RBP13.09□□□□□ -0.31
PTPN20-229ENST00000513756 LARGE1O95461 756 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 SEC24BO95487 1268 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 ODC1P11926 461 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 ARSAP15289 507 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 CYP3A5P20815 502 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 PAX3P23760 479 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 GJA4P35212 333 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 NOLC1Q14978 699 aaKnown RBP eCLIP13.09□□□□□ -0.31
PTPN20-229ENST00000513756 MGAT5BQ3V5L5 792 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 LPCAT2Q7L5N7 544 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 PIP4P1Q86T03 277 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 PDZD3Q86UT5 571 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 HDDC3Q8N4P3 179 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 TTC9BQ8N6N2 239 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 MAB21L3Q8N8X9 362 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 USP13Q92995 863 aaPredicted RBP13.09□□□□□ -0.31
PTPN20-229ENST00000513756 TPSD1Q9BZJ3 242 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 TM6SF1Q9BZW5 370 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 TMEM60Q9H2L4 133 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 BHMT2Q9H2M3 363 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 IL21Q9HBE4 155 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 KMT5AQ9NQR1 393 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 ARHGAP28Q9P2N2 729 aa13.09□□□□□ -0.31
PTPN20-229ENST00000513756 ABLIM1O14639 778 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 TOM1L1O75674 476 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 ALDH1A2O94788 518 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 ENGP17813 658 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 U2AF2P26368 475 aaKnown RBP eCLIP13.08□□□□□ -0.32
PTPN20-229ENST00000513756 MCM7P33993 719 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 MAPK8P45983 427 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 ATXN3P54252 364 aaPredicted RBP13.08□□□□□ -0.32
PTPN20-229ENST00000513756 SMARCB1Q12824 385 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 STRN3Q13033 797 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 NR1H3Q13133 447 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 HNRNPDQ14103 355 aaKnown RBP13.08□□□□□ -0.32
PTPN20-229ENST00000513756 ZNF268Q14587 947 aaPredicted RBP13.08□□□□□ -0.32
PTPN20-229ENST00000513756 ZNF423Q2M1K9 1284 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 SLC39A12Q504Y0 691 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 LMBRD2Q68DH5 695 aaPredicted RBP13.08□□□□□ -0.32
PTPN20-229ENST00000513756 C19orf48Q6RUI8 117 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 RASSF3Q86WH2 238 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 C2orf15Q8WU43 125 aaKnown RBP13.08□□□□□ -0.32
PTPN20-229ENST00000513756 ATP2A3Q93084 1043 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 CNOT6LQ96LI5 555 aaKnown RBP13.08□□□□□ -0.32
PTPN20-229ENST00000513756 ECT2Q9H8V3 914 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 PDRG1Q9NUG6 133 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 UBQLN1Q9UMX0 589 aaKnown RBP13.08□□□□□ -0.32
PTPN20-229ENST00000513756 CCL26Q9Y258 94 aa13.08□□□□□ -0.32
PTPN20-229ENST00000513756 ZNF638Q14966 1978 aaKnown RBP13.08□□□□□ -0.32
PTPN20-229ENST00000513756 BTBD18B2RXH4 712 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 TNFRSF10BO14763 440 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 MAP3K13O43283 966 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 PFKFB2O60825 505 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 BCKDHBP21953 392 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 SEMA3BQ13214 749 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 SPDYCQ5MJ68 293 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 ANO7Q6IWH7 933 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 TAS1R3Q7RTX0 852 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 SYT12Q8IV01 421 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 CHCHD4Q8N4Q1 142 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 GIPC2Q8TF65 315 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 MRPS31Q92665 395 aaKnown RBP13.07□□□□□ -0.32
PTPN20-229ENST00000513756 ZBTB45Q96K62 511 aaPredicted RBP13.07□□□□□ -0.32
PTPN20-229ENST00000513756 SPACA7Q96KW9 195 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 DRC1Q96MC2 740 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 TSPAN18Q96SJ8 248 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 C17orf75Q9HAS0 396 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 DUS2Q9NX74 493 aaKnown RBP13.07□□□□□ -0.32
PTPN20-229ENST00000513756 KCNG1Q9UIX4 513 aa13.07□□□□□ -0.32
PTPN20-229ENST00000513756 ASH1LQ9NR48 2969 aaKnown RBP13.06□□□□□ -0.32
PTPN20-229ENST00000513756 WNT7AO00755 349 aa13.06□□□□□ -0.32
PTPN20-229ENST00000513756 CLDN3O15551 220 aa13.06□□□□□ -0.32
PTPN20-229ENST00000513756 EPB41L2O43491 1005 aaKnown RBP13.06□□□□□ -0.32
PTPN20-229ENST00000513756 F11P03951 625 aa13.06□□□□□ -0.32
PTPN20-229ENST00000513756 CAPNS1P04632 268 aa13.06□□□□□ -0.32
PTPN20-229ENST00000513756 CLTAP09496 248 aa13.06□□□□□ -0.32
PTPN20-229ENST00000513756 CXCL8P10145 99 aa13.06□□□□□ -0.32
PTPN20-229ENST00000513756 ATF6P18850 670 aa13.06□□□□□ -0.32
PTPN20-229ENST00000513756 HOXD12P35452 270 aa13.06□□□□□ -0.32
PTPN20-229ENST00000513756 CCT6AP40227 531 aaKnown RBP13.06□□□□□ -0.32
PTPN20-229ENST00000513756 MATR3P43243 847 aaKnown RBP eCLIP13.06□□□□□ -0.32
PTPN20-229ENST00000513756 IFNAR2P48551 515 aa13.06□□□□□ -0.32
PTPN20-229ENST00000513756 NLRP12P59046 1061 aa13.06□□□□□ -0.32
PTPN20-229ENST00000513756 LILRA4P59901 499 aa13.06□□□□□ -0.32
PTPN20-229ENST00000513756 PPP2R3AQ06190 1150 aa13.06□□□□□ -0.32
PTPN20-229ENST00000513756 BYSLQ13895 437 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms