RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 CALB1P05937 261 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 MYL3P08590 195 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 NFICP08651 508 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 EIF4BP23588 611 aaKnown RBP13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 SSTR3P32745 418 aaPredicted RBP13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 CTNNA1P35221 906 aaKnown RBP13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 GJA9P57773 515 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 RBP5P82980 135 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 TAP1Q03518 808 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 TLE2Q04725 743 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 CCL14Q16627 93 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 NAA35Q5VZE5 725 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 JADE1Q6IE81 842 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 TAF2Q6P1X5 1199 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 HFE2Q6ZVN8 426 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 USP34Q70CQ2 3546 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 CATSPER4Q7RTX7 472 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 IFT20Q8IY31 132 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 C1orf127Q8N9H9 656 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 TMEM35BQ8NCS4 154 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 CXorf38Q8TB03 319 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 CD101Q93033 1021 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 CPB2Q96IY4 423 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 LRRC1Q9BTT6 524 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 LHX5Q9H2C1 402 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 GOLPH3Q9H4A6 298 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 DDX20Q9UHI6 824 aaKnown RBP13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 CEP83Q9Y592 693 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 FRMPD3Q5JV73 1810 aa13.94□□□□□ -0.18
DEPDC1B-206ENST00000512452 RALGAPA2Q2PPJ7 1873 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 GOLGA6L10A0A0M3HER8 536 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 SEC31AO94979 1220 aaKnown RBP13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 CYBAP13498 195 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 COMTP21964 271 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 MMP8P22894 467 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 HOXA11P31270 313 aaPredicted RBP13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 MAN1A1P33908 653 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 DNA2P51530 1060 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 CRYBB1P53674 252 aaPredicted RBP13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 OSTNP61366 133 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 PURAQ00577 322 aaKnown RBP13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 PTP4A2Q12974 167 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 GPS2Q13227 327 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 NNTQ13423 1086 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 COL9A2Q14055 689 aaPredicted RBP13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 MESDQ14696 234 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 KIZQ2M2Z5 673 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 PLEKHA7Q6IQ23 1121 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 EMBQ6PCB8 327 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 TMEM192Q8IY95 271 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 CCDC26Q8TAB7 109 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 CYFIP2Q96F07 1278 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 RUNDC3BQ96NL0 473 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 MTG1Q9BT17 334 aaPredicted RBP13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 SPC25Q9HBM1 224 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 GDF3Q9NR23 364 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 EHD2Q9NZN4 543 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 ADAM22Q9P0K1 906 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 KIAA1257Q9ULG3 409 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 PCDHA3Q9Y5H8 950 aa13.93□□□□□ -0.18
DEPDC1B-206ENST00000512452 MYO1FO00160 1098 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 KRIT1O00522 736 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 KIAA0355O15063 1070 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 MEFVO15553 781 aaPredicted RBP13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 DCXO43602 365 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 SPOPO43791 374 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 CLTBP09497 229 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 PEX5P50542 639 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 YARSP54577 528 aaKnown RBP13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 SEL1L2Q5TEA6 688 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 MAATS1Q7Z4T9 603 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 CDR2LQ86X02 465 aaPredicted RBP13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 ARRDC4Q8NCT1 418 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 CPA5Q8WXQ8 436 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 ELMO3Q96BJ8 720 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 FAM49AQ9H0Q0 323 aaPredicted RBP13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 PARVAQ9NVD7 372 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 DPP3Q9NY33 737 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 SMARCAL1Q9NZC9 954 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 STRIP2Q9ULQ0 834 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 MTCH2Q9Y6C9 303 aa13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 PRRC2BQ5JSZ5 2229 aaKnown RBP13.92□□□□□ -0.18
DEPDC1B-206ENST00000512452 KBTBD13C9JR72 458 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 BHMG1C9JSJ3 638 aaPredicted RBP13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 XPOTO43592 962 aaKnown RBP13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 CSDE1O75534 798 aaKnown RBP13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 PROSCO94903 275 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 NPTXRO95502 500 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 ITGB3P05106 788 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 KRT19P08727 400 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 POU3F3P20264 500 aaPredicted RBP13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 RRM1P23921 792 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 GSCP56915 257 aaPredicted RBP13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 RWDD2BP57060 319 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 INCA1Q0VD86 236 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 MYO1EQ12965 1108 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 PAK2Q13177 524 aa13.91□□□□□ -0.18
DEPDC1B-206ENST00000512452 STILQ15468 1287 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms