RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 PAG1Q9NWQ8 432 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 HSPBP1Q9NZL4 362 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 FOXD3Q9UJU5 478 aaPredicted RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 CPSF3Q9UKF6 684 aaKnown RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 PCDHGA9Q9Y5G4 932 aaKnown RBP5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 PCDHGA8Q9Y5G5 932 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 PCDHGA7Q9Y5G6 932 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 PCDHGA6Q9Y5G7 932 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 PCDHGA3Q9Y5H0 932 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 PCDHGA2Q9Y5H1 932 aa5.35□□□□□ -1.55
TRAPPC11-208ENST00000511955 TRAV6A0A075B6T7 132 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 CTAGE15A4D2H0 777 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 LRRIQ4A6NIV6 560 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 UPK3BL1B0FP48 263 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 UPK3BL2E5RIL1 263 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 C3orf80F5H4A9 247 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 VWA5AO00534 786 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 AP3D1O14617 1153 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 PROM1O43490 865 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 TSPAN1O60635 241 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 DAB1O75553 588 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 ERAL1O75616 437 aaKnown RBP5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 SOAT2O75908 522 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 FLOT1O75955 427 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 SLITRK3O94933 977 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 CTAGE8P0CG41 777 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 SRGAP2BP0DMP2 458 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZBTB48P10074 688 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 SCG2P13521 617 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 BPIP17213 487 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 IL11P20809 199 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 HADHBP55084 474 aaKnown RBP5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 BYSLQ13895 437 aaKnown RBP5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 FRG1Q14331 258 aaKnown RBP5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 TSTQ16762 297 aaKnown RBP5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 ARSIQ5FYB1 569 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 DGKKQ5KSL6 1271 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZMYM1Q5SVZ6 1142 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 SLC9C2Q5TAH2 1124 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 CLEC2AQ6UVW9 174 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 USP50Q70EL3 339 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 NLRC3Q7RTR2 1065 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 PIWIL3Q7Z3Z3 882 aaKnown RBP5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 CTAGE6Q86UF2 777 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 LUZP1Q86V48 1076 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 GAS2L3Q86XJ1 694 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 LIX1LQ8IVB5 337 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 CDAN1Q8IWY9 1227 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 CTAGE4Q8IX94 777 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 GRAMD1CQ8IYS0 662 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 OR56B2PQ8NGI1 322 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 TRAPPC12Q8WVT3 735 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZUFSPQ96AP4 578 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZNF669Q96BR6 464 aaPredicted RBP5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 CDCA5Q96FF9 252 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 RIOK1Q9BRS2 568 aaKnown RBP5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 MTMR12Q9C0I1 747 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 ADAM19Q9H013 955 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 TMEM134Q9H6X4 195 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 ACTR3BQ9P1U1 418 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 TEKT2Q9UIF3 430 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 ARHGAP26Q9UNA1 814 aa5.34□□□□□ -1.55
TRAPPC11-208ENST00000511955 ZNF891A8MT65 544 aaPredicted RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 E2F3O00716 465 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 POLR2DO15514 142 aaKnown RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 DAPK3O43293 454 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 RANBP6O60518 1105 aaKnown RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 SEC22BO75396 215 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 TRIM16O95361 564 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 SGPL1O95470 568 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 STAU1O95793 577 aaKnown RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 OLFM2O95897 454 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 NUDT7P0C024 238 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 C6P13671 934 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 CSF2RAP15509 400 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 ATP5JP18859 108 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 CYP7A1P22680 504 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 MAPK4P31152 587 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 PRKAR1BP31321 381 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 BTDP43251 543 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 PDE1AP54750 535 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 DYNLL1P63167 89 aaKnown RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 RBP5P82980 135 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 TFAP4Q01664 338 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 KLF1Q13351 362 aaPredicted RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 CAMK2GQ13555 558 aaPredicted RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 AARDQ4LEZ3 155 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 EMC10Q5UCC4 262 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 NAA16Q6N069 864 aaPredicted RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 BRAPQ7Z569 592 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 SPATA24Q86W54 205 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 LDHDQ86WU2 507 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 CACNA2D3Q8IZS8 1091 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZGPATQ8N5A5 531 aaKnown RBP5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 CAMKK1Q8N5S9 505 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 C10orf53Q8N6V4 93 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 ANKS4BQ8N8V4 417 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 SMC1BQ8NDV3 1235 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 FAM13CQ8NE31 585 aa5.34□□□□□ -1.56
TRAPPC11-208ENST00000511955 ZFAND2BQ8WV99 257 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms