RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 SIGLEC16A6NMB1 481 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 ACTN2P35609 894 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 PTK6Q13882 451 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 ZBTB6Q15916 424 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 CCNG2Q16589 344 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 RCOR2Q8IZ40 523 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 CHST7Q9NS84 486 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 DPP3Q9NY33 737 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 FEZ2Q9UHY8 353 aaPredicted RBP18.69■□□□□ 0.58
SFXN1-208ENST00000507823 SRCAPQ6ZRS2 3230 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 PDCD11Q14690 1871 aaKnown RBP18.69■□□□□ 0.58
SFXN1-208ENST00000507823 NUDT17P0C025 328 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 RALAP11233 206 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 VDRP11473 427 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 COPS2P61201 443 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 CNGA2Q16280 664 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 DAB2IPQ5VWQ8 1189 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 C17orf99Q6UX52 265 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 GRK7Q8WTQ7 553 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 RBM41Q96IZ5 413 aaKnown RBP18.69■□□□□ 0.58
SFXN1-208ENST00000507823 MCEEQ96PE7 176 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 KIAA1257Q9ULG3 409 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 BARX2Q9UMQ3 279 aaPredicted RBP18.69■□□□□ 0.58
SFXN1-208ENST00000507823 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.69■□□□□ 0.58
SFXN1-208ENST00000507823 AGAP1Q9UPQ3 857 aa18.69■□□□□ 0.58
SFXN1-208ENST00000507823 A6NNZ2 444 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 TP73O15350 636 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 HMGCRP04035 888 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 CAPN2P17655 700 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 KCNJ1P48048 391 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 PLTPP55058 493 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 HUNKP57058 714 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 TUBB8Q3ZCM7 444 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 SLC27A1Q6PCB7 646 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 TMEM130Q8N3G9 435 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 C1orf54Q8WWF1 131 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 SNX27Q96L92 541 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 SCLT1Q96NL6 688 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 HMGXB4Q9UGU5 601 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 TRIP11Q15643 1979 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 DARSP14868 501 aaKnown RBP18.68■□□□□ 0.58
SFXN1-208ENST00000507823 IVDP26440 423 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 EIF3BP55884 814 aaKnown RBP18.68■□□□□ 0.58
SFXN1-208ENST00000507823 ZNF268Q14587 947 aaPredicted RBP18.68■□□□□ 0.58
SFXN1-208ENST00000507823 KIZQ2M2Z5 673 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 CEP85LQ5SZL2 805 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 ALKAL1Q6UXT8 129 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 KDM7AQ6ZMT4 941 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 POLNQ7Z5Q5 900 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 ANKS1BQ7Z6G8 1248 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 TLK2Q86UE8 772 aa18.68■□□□□ 0.58
SFXN1-208ENST00000507823 CD19P15391 556 aa18.67■□□□□ 0.58
SFXN1-208ENST00000507823 AXLP30530 894 aa18.67■□□□□ 0.58
SFXN1-208ENST00000507823 HOXC8P31273 242 aa18.67■□□□□ 0.58
SFXN1-208ENST00000507823 NFX1Q12986 1120 aaKnown RBP18.67■□□□□ 0.58
SFXN1-208ENST00000507823 MFSD10Q14728 455 aa18.67■□□□□ 0.58
SFXN1-208ENST00000507823 KCTD19Q17RG1 926 aaPredicted RBP18.67■□□□□ 0.58
SFXN1-208ENST00000507823 PRAMEF19Q5SWL8 479 aa18.67■□□□□ 0.58
SFXN1-208ENST00000507823 DRICH1Q6PGQ1 229 aaPredicted RBP18.67■□□□□ 0.58
SFXN1-208ENST00000507823 RHBDF2Q6PJF5 856 aa18.67■□□□□ 0.58
SFXN1-208ENST00000507823 ATL2Q8NHH9 583 aa18.67■□□□□ 0.58
SFXN1-208ENST00000507823 SLITRK1Q96PX8 696 aa18.67■□□□□ 0.58
SFXN1-208ENST00000507823 PABPC3Q9H361 631 aaKnown RBP18.67■□□□□ 0.58
SFXN1-208ENST00000507823 MTRF1LQ9UGC7 380 aaKnown RBP18.67■□□□□ 0.58
SFXN1-208ENST00000507823 R3HDM2Q9Y2K5 976 aaKnown RBP18.67■□□□□ 0.58
SFXN1-208ENST00000507823 AGBL2Q5U5Z8 902 aa18.67■□□□□ 0.58
SFXN1-208ENST00000507823 DCUN1D2Q6PH85 259 aa18.67■□□□□ 0.58
SFXN1-208ENST00000507823 RUFY4Q6ZNE9 571 aa18.67■□□□□ 0.58
SFXN1-208ENST00000507823 XYLT1Q86Y38 959 aa18.67■□□□□ 0.58
SFXN1-208ENST00000507823 UBLCP1Q8WVY7 318 aaPredicted RBP18.67■□□□□ 0.58
SFXN1-208ENST00000507823 MCRS1Q96EZ8 462 aa18.67■□□□□ 0.58
SFXN1-208ENST00000507823 DDX56Q9NY93 547 aaKnown RBP18.67■□□□□ 0.58
SFXN1-208ENST00000507823 F8VP50 259 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 MICAL2O94851 1124 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 GPD2P43304 727 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 KRT17Q04695 432 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 HIC1Q14526 733 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 GJD2Q9UKL4 321 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 USTQ9Y2C2 406 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 NPTXRO95502 500 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 MYZAPP0CAP1 466 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 TCF4P15884 667 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 ITIH2P19823 946 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 FGFR4P22455 802 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 CETN2P41208 172 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 PSEN2P49810 448 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 PMS2P54278 862 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 CYP4A22Q5TCH4 519 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 NOTUMQ6P988 496 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 KIF12Q96FN5 646 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 TSPAN18Q96SJ8 248 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 CPXM1Q96SM3 734 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 CDHR5Q9HBB8 845 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 CNTN3Q9P232 1028 aa18.66■□□□□ 0.58
SFXN1-208ENST00000507823 CYP2C9P11712 490 aa18.65■□□□□ 0.58
SFXN1-208ENST00000507823 CPT1AP50416 773 aa18.65■□□□□ 0.58
SFXN1-208ENST00000507823 SLMAPQ14BN4 828 aa18.65■□□□□ 0.58
SFXN1-208ENST00000507823 TAF1CQ15572 869 aaPredicted RBP18.65■□□□□ 0.58
SFXN1-208ENST00000507823 LCLAT1Q6UWP7 414 aa18.65■□□□□ 0.58
SFXN1-208ENST00000507823 LRRC52Q8N7C0 313 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms