RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 WDR27A2RRH5 827 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 USP27XA6NNY8 438 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 WDR64B1ANS9 1081 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 H3BQV1 296 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 I3L4J1 428 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 INO80B-WBP1J3KQ70 363 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 CAPN9O14815 690 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 CHUKO15111 745 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 MSH4O15457 936 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 KIF5CO60282 957 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 ATG13O75143 517 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 RNF40O75150 1001 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 C1QL1O75973 258 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 CDKL5O76039 1030 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 KIAA0754O94854 1291 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 KIF4AO95239 1232 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 LARGE1O95461 756 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 CTDNEP1O95476 244 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 TDP2O95551 362 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 PRKCBP05771 671 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 CCDC175P0C221 793 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 ENGP17813 658 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 CTHP32929 405 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 ABCG1P45844 678 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 NLRP12P59046 1061 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 CDC42EP1Q00587 391 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 MYL5Q02045 173 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 TNK2Q07912 1038 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 IFFO1Q0D2I5 559 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 GRSF1Q12849 480 aaKnown RBP eCLIP5.58□□□□□ -1.52
HTT-202ENST00000502820 LMAN2Q12907 356 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 STK3Q13188 491 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 NAA30Q147X3 362 aaPredicted RBP5.58□□□□□ -1.52
HTT-202ENST00000502820 CRYMQ14894 314 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 KARSQ15046 597 aaKnown RBP5.58□□□□□ -1.52
HTT-202ENST00000502820 TEAD2Q15562 447 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 UGCGQ16739 394 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 Q4G0T1 1027 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 USP39Q53GS9 565 aaKnown RBP5.58□□□□□ -1.52
HTT-202ENST00000502820 WDR44Q5JSH3 913 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 BEND6Q5SZJ8 279 aaPredicted RBP5.58□□□□□ -1.52
HTT-202ENST00000502820 PLA2G4FQ68DD2 849 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 ADALQ6DHV7 355 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 CCDC70Q6NSX1 233 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 TRIM65Q6PJ69 517 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 CPLX2Q6PUV4 134 aaKnown RBP5.58□□□□□ -1.52
HTT-202ENST00000502820 PACS2Q86VP3 889 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 APLFQ8IW19 511 aaPredicted RBP5.58□□□□□ -1.52
HTT-202ENST00000502820 MFSD6LQ8IWD5 586 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 BLIDQ8IZY5 108 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 ZNF843Q8N446 348 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 SMG8Q8ND04 991 aaKnown RBP5.58□□□□□ -1.52
HTT-202ENST00000502820 EHBP1Q8NDI1 1231 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 ENGASEQ8NFI3 743 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 RDM1Q8NG50 284 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 DEPDC1BQ8WUY9 529 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 GJA10Q969M2 543 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 TMEM143Q96AN5 459 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 ZC3H10Q96K80 434 aaKnown RBP5.58□□□□□ -1.52
HTT-202ENST00000502820 ZNF512Q96ME7 567 aaPredicted RBP5.58□□□□□ -1.52
HTT-202ENST00000502820 PNMA5Q96PV4 448 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 PANX2Q96RD6 677 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 TRAIPQ9BWF2 469 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 CARD6Q9BX69 1037 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 NXF3Q9H4D5 531 aaKnown RBP5.58□□□□□ -1.52
HTT-202ENST00000502820 BATF3Q9NR55 127 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 DISC1Q9NRI5 854 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 KIAA1468Q9P260 1216 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 MBD1Q9UIS9 605 aaPredicted RBP5.58□□□□□ -1.52
HTT-202ENST00000502820 CDC23Q9UJX2 597 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 L1RE1Q9UN81 338 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 DOCK5Q9H7D0 1870 aa5.58□□□□□ -1.52
HTT-202ENST00000502820 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 GOLGA6L7A0A1B0GV03 622 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 A0A1W2PRU2 124 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 TULP1O00294 542 aaPredicted RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 SLC37A4O43826 429 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 SH3BP5O60239 455 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 GAS7O60861 476 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 OPHN1O60890 802 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 SASH3O75995 380 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 FSBPO95073 299 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 STBD1O95210 358 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 NPTXRO95502 500 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 KRT10P13645 584 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 FDPSP14324 419 aaKnown RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 HOXA9P31269 272 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 SFNP31947 248 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 SLC8A1P32418 973 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 CCR2P41597 374 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 CDR1P51861 262 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 MNAT1P51948 309 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 JAK3P52333 1124 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 SEC13P55735 322 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 SARNPP82979 210 aaKnown RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 CKAP4Q07065 602 aaKnown RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 ST3GAL1Q11201 340 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 TWF1Q12792 350 aa5.57□□□□□ -1.52
HTT-202ENST00000502820 GNL2Q13823 731 aaKnown RBP5.57□□□□□ -1.52
HTT-202ENST00000502820 TRIM14Q14142 442 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms