RNA–Protein interactions for RNA: ENST00000494748.1

SDF4-207, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 3,516 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-207ENST00000494748 SHOC2Q9UQ13 582 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 ACO1P21399 889 aaKnown RBP16.18■□□□□ 0.18
SDF4-207ENST00000494748 GTF2H1P32780 548 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 CDK16Q00536 496 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 PDIA2Q13087 525 aaKnown RBP16.18■□□□□ 0.18
SDF4-207ENST00000494748 PRKD1Q15139 912 aaPredicted RBP16.18■□□□□ 0.18
SDF4-207ENST00000494748 FNBP1LQ5T0N5 605 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 FAM91A1Q658Y4 838 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 MFSD7Q6UXD7 560 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 FAM196AQ6ZSG2 479 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 ZNF677Q86XU0 584 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 RANBP17Q9H2T7 1088 aaKnown RBP16.18■□□□□ 0.18
SDF4-207ENST00000494748 VCXQ9H320 206 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 CPSF2Q9P2I0 782 aaKnown RBP16.18■□□□□ 0.18
SDF4-207ENST00000494748 PCDHB2Q9Y5E7 798 aa16.18■□□□□ 0.18
SDF4-207ENST00000494748 RNF8O76064 485 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 GSTA2P09210 222 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 GYS1P13807 737 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 KCNA3P22001 575 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 SSTR1P30872 391 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 NEK3P51956 506 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 STAT2P52630 851 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 CCDC174Q6PII3 467 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 MIER3Q7Z3K6 550 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 CCNJLQ8IV13 435 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 FBXO27Q8NI29 283 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 DTX3LQ8TDB6 740 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 C11orf70Q9BRQ4 267 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 TMEM120AQ9BXJ8 343 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 MANSC1Q9H8J5 431 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 SCOCQ9UIL1 159 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 DRG1Q9Y295 367 aaKnown RBP16.17■□□□□ 0.18
SDF4-207ENST00000494748 A0A0G2JND7 137 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 LYPLA2O95372 231 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 TROVE2P10155 538 aaKnown RBP eCLIP16.17■□□□□ 0.18
SDF4-207ENST00000494748 GJC1P36383 396 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 WNT7BP56706 349 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 ANKRD22Q5VYY1 191 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 TXNRD3NBQ6F5E7 133 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 ZC3H18Q86VM9 953 aaKnown RBP16.17■□□□□ 0.18
SDF4-207ENST00000494748 IL31RAQ8NI17 732 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 SPIRE2Q8WWL2 714 aa16.17■□□□□ 0.18
SDF4-207ENST00000494748 ASTN2O75129 1339 aaPredicted RBP16.17■□□□□ 0.18
SDF4-207ENST00000494748 PPEF1O14829 653 aaPredicted RBP16.16■□□□□ 0.18
SDF4-207ENST00000494748 TM9SF1O15321 606 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 SKIP12755 728 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 NSFP46459 744 aaKnown RBP16.16■□□□□ 0.18
SDF4-207ENST00000494748 KCNH7Q9NS40 1196 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 PKD2L1Q9P0L9 805 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 COL20A1Q9P218 1284 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 CNTN3Q9P232 1028 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 ZNF212Q9UDV6 495 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 COL11A2P13942 1736 aaPredicted RBP16.16■□□□□ 0.18
SDF4-207ENST00000494748 E5RJQ4 531 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 GYG2O15488 501 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 RAP1GDS1P52306 607 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 CCDC6Q16204 474 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 KAZNQ674X7 775 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 ENOSF1Q7L5Y1 443 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.16■□□□□ 0.18
SDF4-207ENST00000494748 PAFAH2Q99487 392 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 ALG13Q9NP73 1137 aaKnown RBP16.16■□□□□ 0.18
SDF4-207ENST00000494748 ZNF148Q9UQR1 794 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 USTQ9Y2C2 406 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 TBC1D30Q9Y2I9 924 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 SIP14410 1827 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 TGDSO95455 350 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 SSTR3P32745 418 aaPredicted RBP16.16■□□□□ 0.18
SDF4-207ENST00000494748 VCPP55072 806 aaKnown RBP16.16■□□□□ 0.18
SDF4-207ENST00000494748 CENPUQ71F23 418 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 PHF13Q86YI8 300 aaPredicted RBP16.16■□□□□ 0.18
SDF4-207ENST00000494748 BSNDQ8WZ55 320 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 NKD2Q969F2 451 aaPredicted RBP16.16■□□□□ 0.18
SDF4-207ENST00000494748 KLF6Q99612 283 aaPredicted RBP16.16■□□□□ 0.18
SDF4-207ENST00000494748 ACSS3Q9H6R3 686 aa16.16■□□□□ 0.18
SDF4-207ENST00000494748 CAPN14A8MX76 684 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 GOLGA8RI6L899 631 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 CETN2P41208 172 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 RPL7AP62424 266 aaKnown RBP16.15■□□□□ 0.18
SDF4-207ENST00000494748 TRAF1Q13077 416 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 PASD1Q8IV76 773 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 ZNF184Q99676 751 aaPredicted RBP16.15■□□□□ 0.18
SDF4-207ENST00000494748 PLA2G4CQ9UP65 541 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 TCRBV5S1A1TA0A578 114 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 MAGEA13PA6NCF6 341 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 GOLGA8SH3BPF8 625 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 GOLGA8MH3BSY2 632 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 IL1BP01584 269 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 ITGAVP06756 1048 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 YWHABP31946 246 aaKnown RBP16.15■□□□□ 0.18
SDF4-207ENST00000494748 CHSY1Q86X52 802 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 TMEM121Q9BTD3 319 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 TSSK1BQ9BXA7 367 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 TRIM55Q9BYV6 548 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 SNCAIPQ9Y6H5 919 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 E7ESA3 106 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 ZC3H11AO75152 810 aaKnown RBP eCLIP16.15■□□□□ 0.182e-6■□□□□ 8.9
SDF4-207ENST00000494748 PTPN7P35236 360 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 ARFIP2P53365 341 aa16.15■□□□□ 0.18
SDF4-207ENST00000494748 RCOR2Q8IZ40 523 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms