RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 VIPAS39Q9H9C1 493 aa17.52■□□□□ 0.4
ATG4B-225ENST00000494465 NFU1Q9UMS0 254 aa17.52■□□□□ 0.4
ATG4B-225ENST00000494465 NME7Q9Y5B8 376 aa17.52■□□□□ 0.4
ATG4B-225ENST00000494465 GRIN2DO15399 1336 aa17.52■□□□□ 0.39
ATG4B-225ENST00000494465 TTI1O43156 1089 aa17.52■□□□□ 0.39
ATG4B-225ENST00000494465 MICAL2O94851 1124 aa17.52■□□□□ 0.39
ATG4B-225ENST00000494465 VDRP11473 427 aa17.52■□□□□ 0.39
ATG4B-225ENST00000494465 PRKAR2AP13861 404 aaKnown RBP17.52■□□□□ 0.39
ATG4B-225ENST00000494465 KCNE1P15382 129 aa17.52■□□□□ 0.39
ATG4B-225ENST00000494465 HSPA6P17066 643 aa17.52■□□□□ 0.39
ATG4B-225ENST00000494465 CYP3A5P20815 502 aa17.52■□□□□ 0.39
ATG4B-225ENST00000494465 MAN1A1P33908 653 aa17.52■□□□□ 0.39
ATG4B-225ENST00000494465 TNNT3P45378 269 aaPredicted RBP17.52■□□□□ 0.39
ATG4B-225ENST00000494465 OGDHQ02218 1023 aa17.52■□□□□ 0.39
ATG4B-225ENST00000494465 CNGA2Q16280 664 aa17.52■□□□□ 0.39
ATG4B-225ENST00000494465 C3orf20Q8ND61 904 aa17.52■□□□□ 0.39
ATG4B-225ENST00000494465 HPCAL4Q9UM19 191 aa17.52■□□□□ 0.39
ATG4B-225ENST00000494465 UBQLN1Q9UMX0 589 aaKnown RBP17.52■□□□□ 0.39
ATG4B-225ENST00000494465 GOLGA6L10A0A0M3HER8 536 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 PIRO00625 290 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 CHRNA1P02708 482 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 ASGR1P07306 291 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 ECHS1P30084 290 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 DNAJC24Q6P3W2 148 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 EMBQ6PCB8 327 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 IFT81Q8WYA0 676 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 SEC14L1Q92503 715 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 CAVIN3Q969G5 261 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 HEXIM2Q96MH2 286 aaKnown RBP17.51■□□□□ 0.39
ATG4B-225ENST00000494465 MCEEQ96PE7 176 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 CPXM1Q96SM3 734 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 MRPL45Q9BRJ2 306 aaKnown RBP17.51■□□□□ 0.39
ATG4B-225ENST00000494465 IP6K2Q9UHH9 426 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 TRPV2Q9Y5S1 764 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 SNX9Q9Y5X1 595 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 CEP350Q5VT06 3117 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 TOMM70O94826 608 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 GPD2P43304 727 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 KCNA10Q16322 511 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 PPP2R5EQ16537 467 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 SND1Q7KZF4 910 aaKnown RBP eCLIP17.51■□□□□ 0.39
ATG4B-225ENST00000494465 MAATS1Q7Z4T9 603 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 SESTD1Q86VW0 696 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 TTC39CQ8N584 583 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 CCDC26Q8TAB7 109 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-225ENST00000494465 NT5C1AQ9BXI3 368 aa17.51■□□□□ 0.39
ATG4B-225ENST00000494465 SENP6Q9GZR1 1112 aaPredicted RBP17.51■□□□□ 0.39
ATG4B-225ENST00000494465 H3BQF6 201 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 PSTPIP1O43586 416 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 PHF2O75151 1096 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 HMGCRP04035 888 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 FAM153BP0C7A2 387 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 GSCP56915 257 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-225ENST00000494465 SOX4Q06945 474 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-225ENST00000494465 MGAT3Q09327 533 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 PAK2Q13177 524 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 CYP1B1Q16678 543 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 DEFB115Q30KQ5 88 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 FAM153CQ494X1 144 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 RPAINQ86UA6 219 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 HERPUD2Q9BSE4 406 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 PARP2Q9UGN5 583 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 FAM153AQ9UHL3 310 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 FSCN2O14926 492 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 RARAP10276 462 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 CST5P28325 142 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-225ENST00000494465 SGO2Q562F6 1265 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 FAM47CQ5HY64 1035 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 TWF2Q6IBS0 349 aaKnown RBP17.5■□□□□ 0.39
ATG4B-225ENST00000494465 TTC27Q6P3X3 843 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 RHOT1Q8IXI2 618 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 EIF1ADQ8N9N8 165 aaKnown RBP17.5■□□□□ 0.39
ATG4B-225ENST00000494465 TSPAN18Q96SJ8 248 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 CFHR5Q9BXR6 569 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.5■□□□□ 0.39
ATG4B-225ENST00000494465 STRIP2Q9ULQ0 834 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 ST3GAL5Q9UNP4 418 aa17.5■□□□□ 0.39
ATG4B-225ENST00000494465 ERBB2P04626 1255 aa17.49■□□□□ 0.39
ATG4B-225ENST00000494465 TCF4P15884 667 aa17.49■□□□□ 0.39
ATG4B-225ENST00000494465 TAP1Q03518 808 aa17.49■□□□□ 0.39
ATG4B-225ENST00000494465 SOWAHAQ2M3V2 549 aa17.49■□□□□ 0.39
ATG4B-225ENST00000494465 LCLAT1Q6UWP7 414 aa17.49■□□□□ 0.39
ATG4B-225ENST00000494465 DDX42Q86XP3 938 aaKnown RBP eCLIP17.49■□□□□ 0.39
ATG4B-225ENST00000494465 XYLT1Q86Y38 959 aa17.49■□□□□ 0.39
ATG4B-225ENST00000494465 C12orf29Q8N999 325 aa17.49■□□□□ 0.39
ATG4B-225ENST00000494465 C18orf8Q96DM3 657 aa17.49■□□□□ 0.39
ATG4B-225ENST00000494465 KIAA1257Q9ULG3 409 aa17.49■□□□□ 0.39
ATG4B-225ENST00000494465 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.49■□□□□ 0.39
ATG4B-225ENST00000494465 A0A0U1RQG5 324 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-225ENST00000494465 M0QYV0 167 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 M0QZ92 97 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 SPTLC1O15269 473 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 CD4P01730 458 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 PFKMP08237 780 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 CTSHP09668 335 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 PTGIRP43119 386 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 GABRB2P47870 512 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 NNTQ13423 1086 aa17.48■□□□□ 0.39
ATG4B-225ENST00000494465 MAP3K21Q5TCX8 1036 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms