RNA–Protein interactions for RNA: ENST00000492973.1

TPR-208, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 2

Gene TPR, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-208ENST00000492973 CNGA1P29973 690 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 ICAM3P32942 547 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 TOB1P50616 345 aaPredicted RBP7.71□□□□□ -1.18
TPR-208ENST00000492973 SP2Q02086 613 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 NONOQ15233 471 aaKnown RBP eCLIP7.71□□□□□ -1.18
TPR-208ENST00000492973 GJC2Q5T442 439 aaPredicted RBP7.71□□□□□ -1.18
TPR-208ENST00000492973 IQSEC1Q6DN90 963 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 SEPT14Q6ZU15 432 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 PIK3AP1Q6ZUJ8 805 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 DPH6Q7L8W6 267 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 DCP2Q8IU60 420 aaKnown RBP7.71□□□□□ -1.18
TPR-208ENST00000492973 IGDCC3Q8IVU1 814 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 TBCKQ8TEA7 893 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 MZB1Q8WU39 189 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 SCFD2Q8WU76 684 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 MRFAP1L1Q96HT8 127 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 MBOAT7Q96N66 472 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 ZNF396Q96N95 335 aaPredicted RBP7.71□□□□□ -1.18
TPR-208ENST00000492973 DEFB118Q96PH6 123 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 USP28Q96RU2 1077 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 MPHOSPH6Q99547 160 aaKnown RBP7.71□□□□□ -1.18
TPR-208ENST00000492973 MXRA8Q9BRK3 442 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 WDR11Q9BZH6 1224 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 PIF1Q9H611 641 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 BCAS3Q9H6U6 928 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 JADE2Q9NQC1 790 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 CLDND1Q9NY35 253 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 DDX20Q9UHI6 824 aaKnown RBP7.71□□□□□ -1.18
TPR-208ENST00000492973 DBR1Q9UK59 544 aaKnown RBP7.71□□□□□ -1.18
TPR-208ENST00000492973 FAM184BQ9ULE4 1060 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 SMG5Q9UPR3 1016 aaKnown RBP7.71□□□□□ -1.18
TPR-208ENST00000492973 MRPS23Q9Y3D9 190 aaKnown RBP7.71□□□□□ -1.18
TPR-208ENST00000492973 SIT1Q9Y3P8 196 aa7.71□□□□□ -1.18
TPR-208ENST00000492973 LCTP09848 1927 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 IGLV3-22A0A075B6J6 115 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 CYP3A7-CYP3A51PA0A087WV96 503 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 CCDC194A0A1B0GVG4 234 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 TCAF2A6NFQ2 919 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 CTAGE5O15320 804 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 ATP9AO75110 1047 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 DUSP11O75319 330 aaKnown RBP7.7□□□□□ -1.18
TPR-208ENST00000492973 STAM2O75886 525 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 TDP2O95551 362 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 ARP10275 920 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 CYP3A7P24462 503 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 GPR85P60893 370 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 KRT85P78386 507 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 TNFAIP2Q03169 654 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 SLC9A5Q14940 896 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 LY6KQ17RY6 165 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 DUSP28Q4G0W2 176 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 CEP55Q53EZ4 464 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 NIPA1Q7RTP0 329 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 ZSWIM2Q8NEG5 633 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.7□□□□□ -1.18
TPR-208ENST00000492973 U2AF1L4Q8WU68 220 aaKnown RBP7.7□□□□□ -1.18
TPR-208ENST00000492973 LENG9Q96B70 501 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 UPF3AQ9H1J1 476 aaKnown RBP7.7□□□□□ -1.18
TPR-208ENST00000492973 CFAP45Q9UL16 551 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 OGDHLQ9ULD0 1010 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 CLIC4Q9Y696 253 aa7.7□□□□□ -1.18
TPR-208ENST00000492973 KIAA0100Q14667 2235 aaKnown RBP7.7□□□□□ -1.18
TPR-208ENST00000492973 MYADML2A6NDP7 307 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 FIBPO43427 364 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 SLC37A4O43826 429 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 SGPL1O95470 568 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 PGK1P00558 417 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 TXNP10599 105 aaKnown RBP7.69□□□□□ -1.18
TPR-208ENST00000492973 RARBP10826 455 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 KCNA2P16389 499 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 UBA1P22314 1058 aaKnown RBP7.69□□□□□ -1.18
TPR-208ENST00000492973 IGFBP6P24592 240 aaPredicted RBP7.69□□□□□ -1.18
TPR-208ENST00000492973 GJA9P57773 515 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 NKX3-2P78367 333 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 CEBPZQ03701 1054 aaKnown RBP7.69□□□□□ -1.18
TPR-208ENST00000492973 ARHGAP1Q07960 439 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 ITGB3BPQ13352 177 aaPredicted RBP7.69□□□□□ -1.18
TPR-208ENST00000492973 SLC39A14Q15043 492 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 PTPAQ15257 358 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 KCNA10Q16322 511 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 LETM2Q2VYF4 491 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 RILPL1Q5EBL4 403 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 MOXD1Q6UVY6 613 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 MAMDC2Q7Z304 686 aaPredicted RBP7.69□□□□□ -1.18
TPR-208ENST00000492973 NEK8Q86SG6 692 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 PLA2G4DQ86XP0 818 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 LINC00301Q8NCQ3 95 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 KLHDC9Q8NEP7 349 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 LEO1Q8WVC0 666 aaPredicted RBP7.69□□□□□ -1.18
TPR-208ENST00000492973 SEC14L1Q92503 715 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 PTPRN2Q92932 1015 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 UIMC1Q96RL1 719 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 FTOQ9C0B1 505 aaKnown RBP eCLIP7.69□□□□□ -1.18
TPR-208ENST00000492973 SCAND2PQ9GZW5 306 aaPredicted RBP7.69□□□□□ -1.18
TPR-208ENST00000492973 AGO4Q9HCK5 861 aaKnown RBP7.69□□□□□ -1.18
TPR-208ENST00000492973 XPNPEP3Q9NQH7 507 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 KCNH7Q9NS40 1196 aa7.69□□□□□ -1.18
TPR-208ENST00000492973 PPARGC1AQ9UBK2 798 aaKnown RBP7.69□□□□□ -1.18
TPR-208ENST00000492973 COA3Q9Y2R0 106 aaPredicted RBP7.69□□□□□ -1.18
TPR-208ENST00000492973 Q9Y3F1 56 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms