RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 CLEC11AQ9Y240 323 aa17.02■□□□□ 0.32
MCF2L-229ENST00000488765 ZMPSTE24O75844 475 aa17.02■□□□□ 0.31
MCF2L-229ENST00000488765 UQCRBP14927 111 aa17.02■□□□□ 0.31
MCF2L-229ENST00000488765 SSTR1P30872 391 aa17.02■□□□□ 0.31
MCF2L-229ENST00000488765 ENTPD1P49961 510 aa17.02■□□□□ 0.31
MCF2L-229ENST00000488765 KPNA1P52294 538 aaPredicted RBP17.02■□□□□ 0.31
MCF2L-229ENST00000488765 CHN2P52757 468 aa17.02■□□□□ 0.31
MCF2L-229ENST00000488765 IRX4P78413 519 aa17.02■□□□□ 0.31
MCF2L-229ENST00000488765 RHBDF2Q6PJF5 856 aa17.02■□□□□ 0.31
MCF2L-229ENST00000488765 PRPF39Q86UA1 669 aaKnown RBP17.02■□□□□ 0.31
MCF2L-229ENST00000488765 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.02■□□□□ 0.31
MCF2L-229ENST00000488765 FAM111AQ96PZ2 611 aa17.02■□□□□ 0.31
MCF2L-229ENST00000488765 ZMYM2Q9UBW7 1377 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 LOC100653049A0A140TA62 436 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 BUD23O43709 281 aaKnown RBP17.01■□□□□ 0.31
MCF2L-229ENST00000488765 KRT34O76011 436 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 HALP42357 657 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 SERPINB8P50452 374 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 GTF2IP78347 998 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 ALCAMQ13740 583 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 TLR1Q15399 786 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 TMEM259Q4ZIN3 620 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 ARSHQ5FYA8 562 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 CC2D2BQ6DHV5 1058 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 PDSS2Q86YH6 399 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 OXNAD1Q96HP4 312 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-229ENST00000488765 GJD4Q96KN9 370 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-229ENST00000488765 KCNK13Q9HB14 408 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 PCDHA2Q9Y5H9 948 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 COL1A1P02452 1464 aaPredicted RBP17.01■□□□□ 0.31
MCF2L-229ENST00000488765 HSPA1LP34931 641 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 GPSM2P81274 684 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 KNOP1Q1ED39 458 aaKnown RBP17.01■□□□□ 0.31
MCF2L-229ENST00000488765 USP17L6PQ6QN14 398 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 SMYD1Q8NB12 490 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 QTRT2Q9H974 415 aaKnown RBP17.01■□□□□ 0.31
MCF2L-229ENST00000488765 CYLDQ9NQC7 956 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 ARHGEF4Q9NR80 690 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 NENFQ9UMX5 172 aa17.01■□□□□ 0.31
MCF2L-229ENST00000488765 DIS3Q9Y2L1 958 aaKnown RBP17.01■□□□□ 0.31
MCF2L-229ENST00000488765 TMA7Q9Y2S6 64 aaKnown RBP17.01■□□□□ 0.31
MCF2L-229ENST00000488765 MAGEB2O15479 319 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 LDHAP00338 332 aaKnown RBP17■□□□□ 0.31
MCF2L-229ENST00000488765 SERPINB2P05120 415 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 GRIN3AQ8TCU5 1115 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 TMEM47Q9BQJ4 181 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 TRAIPQ9BWF2 469 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 FHDC1Q9C0D6 1143 aaPredicted RBP17■□□□□ 0.31
MCF2L-229ENST00000488765 PTTG2Q9NZH5 202 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 TMX2-CTNND1H3BSU7 103 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 EDIL3O43854 480 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 BCRP11274 1271 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 STAT4Q14765 748 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 MFSD14BQ5SR56 506 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 ITPRIPL1Q6GPH6 555 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 AMIGO2Q86SJ2 522 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 PCDHB18PQ96TA0 734 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 AGPAT1Q99943 283 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 RAB34Q9BZG1 259 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 ANKRD2Q9GZV1 360 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 USTQ9Y2C2 406 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 PRR5-ARHGAP8B1AHC4 643 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 GSTT2P0CG29 244 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 GSTT2BP0CG30 244 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 MUTP22033 750 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 GPC5P78333 572 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 ARHGAP8P85298 464 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 CDK16Q00536 496 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 GSTM4Q03013 218 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 ZNF564Q8TBZ8 553 aaPredicted RBP17■□□□□ 0.31
MCF2L-229ENST00000488765 PRICKLE1Q96MT3 831 aaPredicted RBP17■□□□□ 0.31
MCF2L-229ENST00000488765 WHRNQ9P202 907 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 IVNS1ABPQ9Y6Y0 642 aa17■□□□□ 0.31
MCF2L-229ENST00000488765 DOT1LQ8TEK3 1739 aa16.99■□□□□ 0.31
MCF2L-229ENST00000488765 TRMUO75648 421 aaKnown RBP16.99■□□□□ 0.31
MCF2L-229ENST00000488765 RXRBP28702 533 aa16.99■□□□□ 0.31
MCF2L-229ENST00000488765 GNA11P29992 359 aa16.99■□□□□ 0.31
MCF2L-229ENST00000488765 TM4SF1P30408 202 aa16.99■□□□□ 0.31
MCF2L-229ENST00000488765 TBL3Q12788 808 aaKnown RBP16.99■□□□□ 0.31
MCF2L-229ENST00000488765 ATP1A4Q13733 1029 aa16.99■□□□□ 0.31
MCF2L-229ENST00000488765 PRR5LQ6MZQ0 368 aa16.99■□□□□ 0.31
MCF2L-229ENST00000488765 ARID3BQ8IVW6 561 aaPredicted RBP16.99■□□□□ 0.31
MCF2L-229ENST00000488765 SH3GLB2Q9NR46 395 aa16.99■□□□□ 0.31
MCF2L-229ENST00000488765 DDX25Q9UHL0 483 aaKnown RBP16.99■□□□□ 0.31
MCF2L-229ENST00000488765 HTR3EA5X5Y0 456 aa16.99■□□□□ 0.31
MCF2L-229ENST00000488765 PI4K2BG5E9Z4 385 aa16.99■□□□□ 0.31
MCF2L-229ENST00000488765 SGPL1O95470 568 aa16.99■□□□□ 0.31
MCF2L-229ENST00000488765 NMT1P30419 496 aaKnown RBP16.99■□□□□ 0.31
MCF2L-229ENST00000488765 CLCN2P51788 898 aa16.99■□□□□ 0.31
MCF2L-229ENST00000488765 ACTR3P61158 418 aa16.99■□□□□ 0.31
MCF2L-229ENST00000488765 DHDDSQ86SQ9 333 aa16.99■□□□□ 0.31
MCF2L-229ENST00000488765 MAFGO15525 162 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 SMIM18P0DKX4 95 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 CACNB3P54284 484 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 ITGA7Q13683 1181 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 ARHGAP27Q6ZUM4 889 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 ANO5Q75V66 913 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 ZNF804AQ7Z570 1209 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 FAM186BQ8IYM0 893 aa16.98■□□□□ 0.31
MCF2L-229ENST00000488765 C17orf50Q8WW18 174 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms