RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 GET4Q7L5D6 327 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-207ENST00000483407 TAS1R1Q7RTX1 841 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 PALB2Q86YC2 1186 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 SLC44A3Q8N4M1 653 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 RSAD2Q8WXG1 361 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 RIN2Q8WYP3 895 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-207ENST00000483407 HAS1Q92839 578 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 SHDQ96IW2 340 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 MYADMQ96S97 322 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 EIF2AK1Q9BQI3 630 aaKnown RBP6.49□□□□□ -1.37
CSDE1-207ENST00000483407 NFKBIZQ9BYH8 718 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 LACRTQ9GZZ8 138 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 NT5C3AQ9H0P0 336 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 NXF3Q9H4D5 531 aaKnown RBP6.49□□□□□ -1.37
CSDE1-207ENST00000483407 TBC1D17Q9HA65 648 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 SH2B1Q9NRF2 756 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-207ENST00000483407 CHST7Q9NS84 486 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 ANKEF1Q9NU02 776 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 PDRG1Q9NUG6 133 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 UBP1Q9NZI7 540 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 FNIP2Q9P278 1114 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 GDF2Q9UK05 429 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-207ENST00000483407 ADAM28Q9UKQ2 775 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 CA14Q9ULX7 337 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 PCDHA12Q9UN75 941 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 EFR3BQ9Y2G0 817 aa6.49□□□□□ -1.37
CSDE1-207ENST00000483407 ZFP37Q9Y6Q3 630 aaPredicted RBP6.49□□□□□ -1.37
CSDE1-207ENST00000483407 SF3B1O75533 1304 aaKnown RBP eCLIP6.49□□□□□ -1.37
CSDE1-207ENST00000483407 ZMYM2Q9UBW7 1377 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 ZFHX2Q9C0A1 2572 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-207ENST00000483407 KRBA1A5PL33 1030 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 RGS9O75916 674 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-207ENST00000483407 STK10O94804 968 aaKnown RBP6.48□□□□□ -1.37
CSDE1-207ENST00000483407 LYPLA2O95372 231 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 PAPLNO95428 1278 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 NPTXRO95502 500 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 EFEMP2O95967 443 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 SPATA31D3P0C874 917 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 LAMP2P13473 410 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 ARF4P18085 180 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-207ENST00000483407 AKAP5P24588 427 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 KRT2P35908 639 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 ARL2P36404 184 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 SPIRE1Q08AE8 756 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 SCRN1Q12765 414 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 ELAVL2Q12926 359 aaKnown RBP6.48□□□□□ -1.37
CSDE1-207ENST00000483407 CAPSQ13938 189 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 HSP90AA2PQ14568 343 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-207ENST00000483407 CALCRLQ16602 461 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 SPECC1Q5M775 1068 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 SCARA3Q6AZY7 606 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 PDXDC1Q6P996 788 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 DCLRE1AQ6PJP8 1040 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 C20orf204Q6ZNR8 217 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 SLCO4C1Q6ZQN7 724 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 SPATA31D4Q6ZUB0 917 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 SLITRK4Q8IW52 837 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 ZBTB8OSQ8IWT0 167 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 SULF2Q8IWU5 870 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 GOLGA6L1Q8N7Z2 621 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 GATAD2BQ8WXI9 593 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 ZNF707Q96C28 371 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-207ENST00000483407 LRRC3Q9BY71 257 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 GPR62Q9BZJ7 368 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 POLR3FQ9H1D9 316 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-207ENST00000483407 MIR1-1HGQ9H1L0 117 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 XPNPEP1Q9NQW7 623 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 ARHGEF3Q9NR81 526 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 SLC2A4RGQ9NR83 387 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 MIOSQ9NXC5 875 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 ORC3Q9UBD5 711 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-207ENST00000483407 STRIP2Q9ULQ0 834 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 STARD13Q9Y3M8 1113 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 SIT1Q9Y3P8 196 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 PCDHB5Q9Y5E4 795 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 EPG5Q9HCE0 2579 aa6.48□□□□□ -1.37
CSDE1-207ENST00000483407 A0A1B0GUA9 196 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 FAM221AA4D161 298 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 LRRIQ4A6NIV6 560 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 ANHXE9PGG2 379 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 F8W810 466 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 RNF225M0QZC1 329 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-207ENST00000483407 N4BP3O15049 544 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 B4GALT5O43286 388 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 USO1O60763 962 aaKnown RBP6.47□□□□□ -1.37
CSDE1-207ENST00000483407 PFKFB2O60825 505 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 F13A1P00488 732 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 THP07101 528 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 DCNP07585 359 aaKnown RBP6.47□□□□□ -1.37
CSDE1-207ENST00000483407 HNRNPA1P09651 372 aaKnown RBP eCLIP6.47□□□□□ -1.37
CSDE1-207ENST00000483407 XRCC6P12956 609 aaKnown RBP eCLIP6.47□□□□□ -1.37
CSDE1-207ENST00000483407 RPL17P18621 184 aaKnown RBP6.47□□□□□ -1.37
CSDE1-207ENST00000483407 EPHA1P21709 976 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 GLRA2P23416 452 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 ARNTP27540 789 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 HOXA9P31269 272 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 NASPP49321 788 aaPredicted RBP6.47□□□□□ -1.37
CSDE1-207ENST00000483407 RARRES1P49788 294 aa6.47□□□□□ -1.37
CSDE1-207ENST00000483407 SRSF11Q05519 484 aaKnown RBP6.47□□□□□ -1.37
CSDE1-207ENST00000483407 ZNF252P-AS1Q0IIN9 211 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms