RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 OSTM1Q86WC4 334 aa22.39■■□□□ 1.17
SEC13-217ENST00000482647 FEZF2Q8TBJ5 459 aa22.39■■□□□ 1.17
SEC13-217ENST00000482647 SLC35C1Q96A29 364 aa22.39■■□□□ 1.17
SEC13-217ENST00000482647 POMKQ9H5K3 350 aa22.39■■□□□ 1.17
SEC13-217ENST00000482647 HSFX1Q9UBD0 423 aa22.39■■□□□ 1.17
SEC13-217ENST00000482647 POLIQ9UNA4 740 aa22.39■■□□□ 1.17
SEC13-217ENST00000482647 INSL5Q9Y5Q6 135 aa22.39■■□□□ 1.17
SEC13-217ENST00000482647 MTMR11A4FU01 709 aa22.38■■□□□ 1.17
SEC13-217ENST00000482647 CCDC192P0DO97 292 aa22.38■■□□□ 1.17
SEC13-217ENST00000482647 ACAT1P24752 427 aaKnown RBP22.38■■□□□ 1.17
SEC13-217ENST00000482647 ZP2Q05996 745 aa22.38■■□□□ 1.17
SEC13-217ENST00000482647 DUSP4Q13115 394 aa22.38■■□□□ 1.17
SEC13-217ENST00000482647 NFE2Q16621 373 aaPredicted RBP22.38■■□□□ 1.17
SEC13-217ENST00000482647 INTS6LQ5JSJ4 861 aaKnown RBP22.38■■□□□ 1.17
SEC13-217ENST00000482647 SASS6Q6UVJ0 657 aa22.38■■□□□ 1.17
SEC13-217ENST00000482647 ATAD1Q8NBU5 361 aa22.38■■□□□ 1.17
SEC13-217ENST00000482647 FBXL13Q8NEE6 735 aa22.38■■□□□ 1.17
SEC13-217ENST00000482647 OR6B3Q8NGW1 331 aa22.38■■□□□ 1.17
SEC13-217ENST00000482647 NECAB3Q96P71 396 aaPredicted RBP22.38■■□□□ 1.17
SEC13-217ENST00000482647 MRPL45Q9BRJ2 306 aaKnown RBP22.38■■□□□ 1.17
SEC13-217ENST00000482647 WDR6Q9NNW5 1121 aaKnown RBP22.38■■□□□ 1.17
SEC13-217ENST00000482647 RAB20Q9NX57 234 aa22.38■■□□□ 1.17
SEC13-217ENST00000482647 CDH9Q9ULB4 789 aa22.38■■□□□ 1.17
SEC13-217ENST00000482647 PLXNA3P51805 1871 aa22.37■■□□□ 1.17
SEC13-217ENST00000482647 VNN2O95498 520 aa22.37■■□□□ 1.17
SEC13-217ENST00000482647 PTMSP20962 102 aa22.37■■□□□ 1.17
SEC13-217ENST00000482647 LMO2P25791 158 aa22.37■■□□□ 1.17
SEC13-217ENST00000482647 MARSP56192 900 aaKnown RBP22.37■■□□□ 1.17
SEC13-217ENST00000482647 PLD1Q13393 1074 aa22.37■■□□□ 1.17
SEC13-217ENST00000482647 TPD52L1Q16890 204 aaPredicted RBP22.37■■□□□ 1.17
SEC13-217ENST00000482647 RPGRIP1Q96KN7 1286 aa22.37■■□□□ 1.17
SEC13-217ENST00000482647 MED15Q96RN5 788 aa22.37■■□□□ 1.17
SEC13-217ENST00000482647 PI4K2AQ9BTU6 479 aa22.37■■□□□ 1.17
SEC13-217ENST00000482647 SLC27A5Q9Y2P5 690 aa22.37■■□□□ 1.17
SEC13-217ENST00000482647 NR2E1Q9Y466 385 aa22.37■■□□□ 1.17
SEC13-217ENST00000482647 TTC28Q96AY4 2481 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 PDGFRBP09619 1106 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 SSTR3P32745 418 aaPredicted RBP22.36■■□□□ 1.17
SEC13-217ENST00000482647 ALDH1A3P47895 512 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 TUFMP49411 452 aaKnown RBP22.36■■□□□ 1.17
SEC13-217ENST00000482647 TWF1Q12792 350 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 CBWD6Q4V339 395 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 WDR44Q5JSH3 913 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 CBWD3Q5JTY5 395 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 CBWD5Q5RIA9 395 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 SPOPLQ6IQ16 392 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 GRASPQ7Z6J2 395 aaPredicted RBP22.36■■□□□ 1.17
SEC13-217ENST00000482647 GJD3Q8N144 294 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 ELMOD1Q8N336 334 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 SPPL2BQ8TCT7 592 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 ELMO3Q96BJ8 720 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 COL25A1Q9BXS0 654 aaPredicted RBP22.36■■□□□ 1.17
SEC13-217ENST00000482647 SMYD3Q9H7B4 428 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 PCDHB5Q9Y5E4 795 aa22.36■■□□□ 1.17
SEC13-217ENST00000482647 C19orf67A6NJJ6 358 aa22.35■■□□□ 1.17
SEC13-217ENST00000482647 N4BP1O75113 896 aaKnown RBP22.35■■□□□ 1.17
SEC13-217ENST00000482647 NOP14P78316 857 aaKnown RBP22.35■■□□□ 1.17
SEC13-217ENST00000482647 CETN1Q12798 172 aa22.35■■□□□ 1.17
SEC13-217ENST00000482647 MAPRE1Q15691 268 aaKnown RBP22.35■■□□□ 1.17
SEC13-217ENST00000482647 SCARA5Q6ZMJ2 495 aa22.35■■□□□ 1.17
SEC13-217ENST00000482647 CREBRFQ8IUR6 639 aa22.35■■□□□ 1.17
SEC13-217ENST00000482647 TRIM59Q8IWR1 403 aa22.35■■□□□ 1.17
SEC13-217ENST00000482647 SEMA4DQ92854 862 aa22.35■■□□□ 1.17
SEC13-217ENST00000482647 SYT15Q9BQS2 421 aa22.35■■□□□ 1.17
SEC13-217ENST00000482647 CRISPLD1Q9H336 500 aa22.35■■□□□ 1.17
SEC13-217ENST00000482647 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.35■■□□□ 1.173e-6■■■■□ 23.3
SEC13-217ENST00000482647 ABI2Q9NYB9 513 aaPredicted RBP22.35■■□□□ 1.17
SEC13-217ENST00000482647 GTF3C4Q9UKN8 822 aa22.35■■□□□ 1.17
SEC13-217ENST00000482647 COQ4Q9Y3A0 265 aa22.35■■□□□ 1.17
SEC13-217ENST00000482647 YIPF1Q9Y548 306 aa22.35■■□□□ 1.17
SEC13-217ENST00000482647 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.35■■□□□ 1.17
SEC13-217ENST00000482647 MYBPHLA2RUH7 354 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 A8MXQ7 604 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 LOC730098B7Z3J9 87 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 PMM2O15305 246 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 HCRTO43612 131 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 PTPN2P17706 415 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 ASPAP45381 313 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 FMO5P49326 533 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 EPHB3P54753 998 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 CDH8P55286 799 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 MGAT5BQ3V5L5 792 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 IQCEQ6IPM2 695 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 FAM171BQ6P995 826 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 OTOP3Q7RTS5 596 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 FAXDC2Q96IV6 333 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 ZNF512Q96ME7 567 aaPredicted RBP22.34■■□□□ 1.17
SEC13-217ENST00000482647 PKMYT1Q99640 499 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 SEPT5Q99719 369 aaPredicted RBP22.34■■□□□ 1.17
SEC13-217ENST00000482647 NIF3L1Q9GZT8 377 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 THAP9Q9H5L6 903 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 CYP3A43Q9HB55 503 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 APOBEC3GQ9HC16 384 aaKnown RBP22.34■■□□□ 1.17
SEC13-217ENST00000482647 ABCB6Q9NP58 842 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 TMLHEQ9NVH6 421 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 ANO10Q9NW15 660 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 TMEM63CQ9P1W3 806 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 USTQ9Y2C2 406 aa22.34■■□□□ 1.17
SEC13-217ENST00000482647 CLUHO75153 1309 aa22.33■■□□□ 1.17
SEC13-217ENST00000482647 ATP2C2O75185 946 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms