RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 ATP2C1P98194 919 aaPredicted RBP8□□□□□ -1.13
CBX3-206ENST00000481057 RAB30Q15771 203 aa8□□□□□ -1.13
CBX3-206ENST00000481057 TBC1D16Q8TBP0 767 aa8□□□□□ -1.13
CBX3-206ENST00000481057 SSH1Q8WYL5 1049 aa8□□□□□ -1.13
CBX3-206ENST00000481057 COA7Q96BR5 231 aa8□□□□□ -1.13
CBX3-206ENST00000481057 LRRC37BQ96QE4 947 aa8□□□□□ -1.13
CBX3-206ENST00000481057 DPYSL5Q9BPU6 564 aa8□□□□□ -1.13
CBX3-206ENST00000481057 MXD3Q9BW11 206 aa8□□□□□ -1.13
CBX3-206ENST00000481057 JAG2Q9Y219 1238 aa8□□□□□ -1.13
CBX3-206ENST00000481057 SPEF1Q9Y4P9 236 aa8□□□□□ -1.13
CBX3-206ENST00000481057 USP16Q9Y5T5 823 aa8□□□□□ -1.13
CBX3-206ENST00000481057 ZNF536O15090 1300 aa8□□□□□ -1.13
CBX3-206ENST00000481057 BPTFQ12830 3046 aa7.99□□□□□ -1.13
CBX3-206ENST00000481057 PMS2P1A4D2B8 440 aa7.99□□□□□ -1.13
CBX3-206ENST00000481057 LRRC37AA6NMS7 1700 aa7.99□□□□□ -1.13
CBX3-206ENST00000481057 SLC26A4O43511 780 aa7.99□□□□□ -1.13
CBX3-206ENST00000481057 TMEM127O75204 238 aa7.99□□□□□ -1.13
CBX3-206ENST00000481057 TOX4O94842 621 aa7.99□□□□□ -1.13
CBX3-206ENST00000481057 CCT2P78371 535 aaKnown RBP7.99□□□□□ -1.13
CBX3-206ENST00000481057 MEF2AQ02078 507 aaPredicted RBP7.99□□□□□ -1.13
CBX3-206ENST00000481057 PCBP2Q15366 365 aaKnown RBP eCLIP7.99□□□□□ -1.13
CBX3-206ENST00000481057 PTPN21Q16825 1174 aa7.99□□□□□ -1.13
CBX3-206ENST00000481057 ANO4Q32M45 955 aa7.99□□□□□ -1.13
CBX3-206ENST00000481057 MBNL2Q5VZF2 373 aaKnown RBP7.99□□□□□ -1.13
CBX3-206ENST00000481057 KRT40Q6A162 431 aa7.99□□□□□ -1.13
CBX3-206ENST00000481057 ZNF790Q6PG37 636 aa7.99□□□□□ -1.13
CBX3-206ENST00000481057 ZBED3Q96IU2 234 aaPredicted RBP7.99□□□□□ -1.13
CBX3-206ENST00000481057 ACE2Q9BYF1 805 aaPredicted RBP7.99□□□□□ -1.13
CBX3-206ENST00000481057 SLC13A1Q9BZW2 595 aa7.99□□□□□ -1.13
CBX3-206ENST00000481057 MSL2Q9HCI7 577 aa7.99□□□□□ -1.13
CBX3-206ENST00000481057 DLL3Q9NYJ7 618 aa7.99□□□□□ -1.13
CBX3-206ENST00000481057 ARID1BQ8NFD5 2236 aaPredicted RBP7.99□□□□□ -1.13
CBX3-206ENST00000481057 AOX1Q06278 1338 aa7.99□□□□□ -1.13
CBX3-206ENST00000481057 EP300Q09472 2414 aaPredicted RBP7.99□□□□□ -1.13
CBX3-206ENST00000481057 BRWD1Q9NSI6 2320 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 DOCK3Q8IZD9 2030 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 MTSS1O43312 755 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 PCDHGA12O60330 932 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 VSIG10L2P0DP72 767 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 CR2P20023 1033 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 KIR2DL3P43628 341 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 FPGSQ05932 587 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 CLUL1Q15846 466 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 ADRM1Q16186 407 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 GAGE13Q4V321 117 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 SLC10A5Q5PT55 438 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 MAP3K21Q5TCX8 1036 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 TAS1R1Q7RTX1 841 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 ANKRD53Q8N9V6 530 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 GLB1L3Q8NCI6 653 aaPredicted RBP7.98□□□□□ -1.13
CBX3-206ENST00000481057 RABGGTAQ92696 567 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 CEP89Q96ST8 783 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 PARK7Q99497 189 aaKnown RBP7.98□□□□□ -1.13
CBX3-206ENST00000481057 PCDHGA9Q9Y5G4 932 aaKnown RBP7.98□□□□□ -1.13
CBX3-206ENST00000481057 PCDHGA8Q9Y5G5 932 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 PCDHGA7Q9Y5G6 932 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 PCDHGA6Q9Y5G7 932 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 PCDHGA3Q9Y5H0 932 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 PCDHGA2Q9Y5H1 932 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 PSME4Q14997 1843 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 ZNF804BA4D1E1 1349 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 CEP250Q9BV73 2442 aa7.98□□□□□ -1.13
CBX3-206ENST00000481057 CEMIPQ8WUJ3 1361 aa7.97□□□□□ -1.13
CBX3-206ENST00000481057 ALDH1A2O94788 518 aa7.97□□□□□ -1.13
CBX3-206ENST00000481057 JUNP05412 331 aaKnown RBP7.97□□□□□ -1.13
CBX3-206ENST00000481057 LTA4HP09960 611 aaKnown RBP7.97□□□□□ -1.13
CBX3-206ENST00000481057 DUSP8Q13202 625 aa7.97□□□□□ -1.13
CBX3-206ENST00000481057 PLEKHG6Q3KR16 790 aa7.97□□□□□ -1.13
CBX3-206ENST00000481057 BTNL9Q6UXG8 535 aa7.97□□□□□ -1.13
CBX3-206ENST00000481057 ERO1BQ86YB8 467 aa7.97□□□□□ -1.13
CBX3-206ENST00000481057 MSL3Q8N5Y2 521 aaKnown RBP7.97□□□□□ -1.13
CBX3-206ENST00000481057 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.97□□□□□ -1.13
CBX3-206ENST00000481057 FATE1Q969F0 183 aa7.97□□□□□ -1.13
CBX3-206ENST00000481057 GPHA2Q96T91 129 aa7.97□□□□□ -1.13
CBX3-206ENST00000481057 SSBP3Q9BWW4 388 aaPredicted RBP7.97□□□□□ -1.13
CBX3-206ENST00000481057 C12orf65Q9H3J6 166 aaKnown RBP7.97□□□□□ -1.13
CBX3-206ENST00000481057 SCOCQ9UIL1 159 aa7.97□□□□□ -1.13
CBX3-206ENST00000481057 KMT2EQ8IZD2 1858 aa7.97□□□□□ -1.13
CBX3-206ENST00000481057 NPEPPSL1A6NEC2 478 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 TMEM221A6NGB7 291 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 M0R296 226 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 CDC14BO60729 498 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 MMP14P50281 582 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 NEK2P51955 445 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 RIN1Q13671 783 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 TRIM60Q495X7 471 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 SLC39A5Q6ZMH5 540 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 PPP1R42Q7Z4L9 355 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 KIAA2013Q8IYS2 634 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 GPR135Q8IZ08 494 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.96□□□□□ -1.14
CBX3-206ENST00000481057 SHCBP1Q8NEM2 672 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.96□□□□□ -1.14
CBX3-206ENST00000481057 TRIB2Q92519 343 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 JADE3Q92613 823 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 CHMP4CQ96CF2 233 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 RPL10LQ96L21 214 aaKnown RBP7.96□□□□□ -1.14
CBX3-206ENST00000481057 GNRHR2Q96P88 292 aa7.96□□□□□ -1.14
CBX3-206ENST00000481057 RBM15Q96T37 977 aaKnown RBP eCLIP7.96□□□□□ -1.14
CBX3-206ENST00000481057 ING3Q9NXR8 418 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms