RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 ACCSQ96QU6 501 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 PYM1Q9BRP8 204 aaKnown RBP7.66□□□□□ -1.18
COL17A1-205ENST00000480127 LSM14BQ9BX40 385 aaKnown RBP7.66□□□□□ -1.18
COL17A1-205ENST00000480127 OXCT2Q9BYC2 517 aaPredicted RBP7.66□□□□□ -1.18
COL17A1-205ENST00000480127 CRISPLD1Q9H336 500 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 GTSE1Q9NYZ3 720 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 AGO2Q9UKV8 859 aaKnown RBP7.66□□□□□ -1.18
COL17A1-205ENST00000480127 DSEQ9UL01 958 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 YIPF1Q9Y548 306 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 MYH11P35749 1972 aa7.66□□□□□ -1.18
COL17A1-205ENST00000480127 CFAP47Q6ZTR5 3102 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.65□□□□□ -1.18
COL17A1-205ENST00000480127 CITO14578 2027 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 FGF19O95750 216 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 OR4Q2P0C623 313 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 HOXB3P14651 431 aaPredicted RBP7.65□□□□□ -1.18
COL17A1-205ENST00000480127 GAP43P17677 238 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 PROZP22891 400 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 NMT1P30419 496 aaKnown RBP7.65□□□□□ -1.18
COL17A1-205ENST00000480127 DDIT3P35638 169 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 TNFSF9P41273 254 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 PXNP49023 591 aaPredicted RBP7.65□□□□□ -1.18
COL17A1-205ENST00000480127 ACOT2P49753 483 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 GUCY2FP51841 1108 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 CDR1P51861 262 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 NCKAP1LP55160 1127 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 COL9A2Q14055 689 aaPredicted RBP7.65□□□□□ -1.18
COL17A1-205ENST00000480127 ENOX2Q16206 610 aaKnown RBP7.65□□□□□ -1.18
COL17A1-205ENST00000480127 SLC10A6Q3KNW5 377 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 SLC39A12Q504Y0 691 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 ARHGAP29Q52LW3 1261 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 HYIQ5T013 277 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 FOXD4L5Q5VV16 416 aaPredicted RBP7.65□□□□□ -1.18
COL17A1-205ENST00000480127 JADE1Q6IE81 842 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 GAREM2Q75VX8 874 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 CACNA2D4Q7Z3S7 1137 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 SFR1Q86XK3 245 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 HSCBQ8IWL3 235 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 TMEM130Q8N3G9 435 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 SYNPOQ8N3V7 929 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 PDILTQ8N807 584 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 FOXD4L4Q8WXT5 416 aaPredicted RBP7.65□□□□□ -1.18
COL17A1-205ENST00000480127 SENP8Q96LD8 212 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 ZNF396Q96N95 335 aaPredicted RBP7.65□□□□□ -1.18
COL17A1-205ENST00000480127 FAM213AQ9BRX8 229 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 NTPCRQ9BSD7 190 aaKnown RBP7.65□□□□□ -1.18
COL17A1-205ENST00000480127 PANK2Q9BZ23 570 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 LRRC27Q9C0I9 530 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 ATXN3LQ9H3M9 355 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 SMOC1Q9H4F8 434 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 OBP2AQ9NY56 170 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 ABI2Q9NYB9 513 aaPredicted RBP7.65□□□□□ -1.18
COL17A1-205ENST00000480127 STK17AQ9UEE5 414 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 SLC27A5Q9Y2P5 690 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 PCDHB13Q9Y5F0 798 aa7.65□□□□□ -1.18
COL17A1-205ENST00000480127 TRIP11Q15643 1979 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 GREB1Q4ZG55 1949 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 PDCD11Q14690 1871 aaKnown RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 CCDC163A0A0D9SF12 145 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 C1QTNF9BB2RNN3 333 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 M0QZQ0 153 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 CYB561D2O14569 222 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 HUS1O60921 280 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 RPP40O75818 363 aaKnown RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 OAZ2O95190 189 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 IL18RAPO95256 599 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 CD2BP2O95400 341 aaKnown RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 NFICP08651 508 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 TMEM191BP0C7N4 346 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 C1QTNF9P0C862 333 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 CYP3A5P20815 502 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 PAX3P23760 479 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 TUFMP49411 452 aaKnown RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 TAF6P49848 677 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 TNK2Q07912 1038 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 BFSP1Q12934 665 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 MYO1EQ12965 1108 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 DUSP4Q13115 394 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 FOXD4L6Q3SYB3 417 aaPredicted RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 SV2CQ496J9 727 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 ZC2HC1CQ53FD0 456 aaPredicted RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 ARSHQ5FYA8 562 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 CENPPQ6IPU0 288 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 CC2D1AQ6P1N0 951 aaPredicted RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 FOXD4L3Q6VB84 417 aaPredicted RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 DNAJB7Q7Z6W7 309 aaPredicted RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 CCDC65Q8IXS2 484 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 DCP1BQ8IZD4 617 aaKnown RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 CHFRQ96EP1 664 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 EPSTI1Q96J88 318 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 ZC3H10Q96K80 434 aaKnown RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 TSPAN18Q96SJ8 248 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 TMEM121BQ9BXQ6 578 aaPredicted RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 POLR3BQ9NW08 1133 aaPredicted RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 THG1LQ9NWX6 298 aaKnown RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 DPP3Q9NY33 737 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 SEL1LQ9UBV2 794 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 ZMIZ1Q9ULJ6 1067 aa7.64□□□□□ -1.19
COL17A1-205ENST00000480127 MAGED2Q9UNF1 606 aaPredicted RBP7.64□□□□□ -1.19
COL17A1-205ENST00000480127 WASF3Q9UPY6 502 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms